Gambospiroene

Details

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Internal ID ca7ae07f-8288-432b-afb3-2f5b0b22aa63
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 6-[(2E)-3,7-dimethylocta-2,6-dienyl]-5,7-dihydroxy-2',15,15-trimethyl-4-(3-methylbut-2-enyl)spiro[2,16-dioxatetracyclo[8.7.0.01,14.03,8]heptadeca-3,5,7,11-tetraene-17,5'-cyclohex-2-ene]-1',9-dione
SMILES (Canonical) CC1=CCC2(CC1=O)C34C(CC=CC3C(=O)C5=C(C(=C(C(=C5O4)CC=C(C)C)O)CC=C(C)CCC=C(C)C)O)C(O2)(C)C
SMILES (Isomeric) CC1=CCC2(CC1=O)C34C(CC=CC3C(=O)C5=C(C(=C(C(=C5O4)CC=C(C)C)O)C/C=C(\C)/CCC=C(C)C)O)C(O2)(C)C
InChI InChI=1S/C38H48O6/c1-22(2)11-9-12-24(5)16-18-26-32(40)27(17-15-23(3)4)35-31(33(26)41)34(42)28-13-10-14-30-36(7,8)44-37(38(28,30)43-35)20-19-25(6)29(39)21-37/h10-11,13,15-16,19,28,30,40-41H,9,12,14,17-18,20-21H2,1-8H3/b24-16+
InChI Key BASBNFFOTUXIJJ-LFVJCYFKSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C38H48O6
Molecular Weight 600.80 g/mol
Exact Mass 600.34508925 g/mol
Topological Polar Surface Area (TPSA) 93.10 Ų
XlogP 8.80
Atomic LogP (AlogP) 8.20
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 7

Synonyms

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RefChem:142252
1097882-25-1
CHEMBL541964

2D Structure

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2D Structure of Gambospiroene

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9862 98.62%
Caco-2 - 0.7604 76.04%
Blood Brain Barrier + 0.7500 75.00%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.7589 75.89%
OATP2B1 inhibitior - 0.7117 71.17%
OATP1B1 inhibitior + 0.7844 78.44%
OATP1B3 inhibitior - 0.2187 21.87%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.6564 65.64%
BSEP inhibitior + 0.9961 99.61%
P-glycoprotein inhibitior + 0.8631 86.31%
P-glycoprotein substrate + 0.5205 52.05%
CYP3A4 substrate + 0.7128 71.28%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8401 84.01%
CYP3A4 inhibition - 0.6560 65.60%
CYP2C9 inhibition - 0.6611 66.11%
CYP2C19 inhibition - 0.7797 77.97%
CYP2D6 inhibition - 0.8986 89.86%
CYP1A2 inhibition + 0.5147 51.47%
CYP2C8 inhibition + 0.6928 69.28%
CYP inhibitory promiscuity - 0.6462 64.62%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.5996 59.96%
Eye corrosion - 0.9914 99.14%
Eye irritation - 0.8969 89.69%
Skin irritation - 0.6538 65.38%
Skin corrosion - 0.9182 91.82%
Ames mutagenesis - 0.5700 57.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6570 65.70%
Micronuclear - 0.7900 79.00%
Hepatotoxicity - 0.5875 58.75%
skin sensitisation - 0.7904 79.04%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.7750 77.50%
Nephrotoxicity - 0.5705 57.05%
Acute Oral Toxicity (c) III 0.3527 35.27%
Estrogen receptor binding + 0.7955 79.55%
Androgen receptor binding + 0.7402 74.02%
Thyroid receptor binding + 0.6447 64.47%
Glucocorticoid receptor binding + 0.8273 82.73%
Aromatase binding + 0.7526 75.26%
PPAR gamma + 0.7463 74.63%
Honey bee toxicity - 0.6841 68.41%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity + 0.5400 54.00%
Fish aquatic toxicity + 0.9951 99.51%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.59% 91.11%
CHEMBL2581 P07339 Cathepsin D 96.58% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 93.72% 94.73%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.08% 89.00%
CHEMBL1937 Q92769 Histone deacetylase 2 91.58% 94.75%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.75% 96.09%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.47% 99.23%
CHEMBL221 P23219 Cyclooxygenase-1 88.55% 90.17%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.76% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.03% 94.45%
CHEMBL5103 Q969S8 Histone deacetylase 10 85.65% 90.08%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 84.85% 85.14%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.25% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.08% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Garcinia hanburyi
Isodon rubescens
Isodon ternifolius

Cross-Links

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PubChem 45268894
NPASS NPC476162
ChEMBL CHEMBL541964
LOTUS LTS0193741
wikiData Q104992142