(1S,2S,4S,4'S,5'S,6R,7S,8R,9S,12S,13R,15R,16R,18R,19R)-5',7,9,13-tetramethyl-4'-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-15,16,18,19-tetrol

Details

Top
Internal ID 0500cfdd-4853-4a9e-a132-78bb4b21f2b6
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (1S,2S,4S,4'S,5'S,6R,7S,8R,9S,12S,13R,15R,16R,18R,19R)-5',7,9,13-tetramethyl-4'-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-15,16,18,19-tetrol
SMILES (Canonical) CC1COC2(CC1OC3C(C(C(C(O3)CO)O)O)O)C(C4C(O2)CC5C4(CCC6C5CC(C7(C6(CC(C(C7)O)O)C)O)O)C)C
SMILES (Isomeric) C[C@H]1CO[C@@]2(C[C@@H]1O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)[C@H]([C@H]4[C@@H](O2)C[C@@H]5[C@@]4(CC[C@H]6[C@H]5C[C@H]([C@@]7([C@@]6(C[C@H]([C@@H](C7)O)O)C)O)O)C)C
InChI InChI=1S/C33H54O12/c1-14-13-42-33(11-22(14)43-29-28(40)27(39)26(38)23(12-34)44-29)15(2)25-21(45-33)8-18-16-7-24(37)32(41)10-20(36)19(35)9-31(32,4)17(16)5-6-30(18,25)3/h14-29,34-41H,5-13H2,1-4H3/t14-,15-,16+,17-,18-,19+,20+,21-,22-,23+,24+,25-,26+,27-,28+,29+,30-,31+,32-,33+/m0/s1
InChI Key XDSQUFWATLAARL-UISREXETSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C33H54O12
Molecular Weight 642.80 g/mol
Exact Mass 642.36152715 g/mol
Topological Polar Surface Area (TPSA) 199.00 Ų
XlogP 0.50
Atomic LogP (AlogP) -0.35
H-Bond Acceptor 12
H-Bond Donor 8
Rotatable Bonds 3

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (1S,2S,4S,4'S,5'S,6R,7S,8R,9S,12S,13R,15R,16R,18R,19R)-5',7,9,13-tetramethyl-4'-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-15,16,18,19-tetrol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5246 52.46%
Caco-2 - 0.8615 86.15%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.6174 61.74%
OATP2B1 inhibitior - 0.7282 72.82%
OATP1B1 inhibitior + 0.8865 88.65%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior + 0.6250 62.50%
BSEP inhibitior - 0.7095 70.95%
P-glycoprotein inhibitior + 0.6446 64.46%
P-glycoprotein substrate - 0.6014 60.14%
CYP3A4 substrate + 0.7487 74.87%
CYP2C9 substrate - 0.8018 80.18%
CYP2D6 substrate - 0.8301 83.01%
CYP3A4 inhibition - 0.9473 94.73%
CYP2C9 inhibition - 0.9215 92.15%
CYP2C19 inhibition - 0.8997 89.97%
CYP2D6 inhibition - 0.9561 95.61%
CYP1A2 inhibition - 0.9215 92.15%
CYP2C8 inhibition + 0.6969 69.69%
CYP inhibitory promiscuity - 0.9616 96.16%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6223 62.23%
Eye corrosion - 0.9917 99.17%
Eye irritation - 0.9221 92.21%
Skin irritation - 0.6555 65.55%
Skin corrosion - 0.9521 95.21%
Ames mutagenesis - 0.7215 72.15%
Human Ether-a-go-go-Related Gene inhibition + 0.7535 75.35%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.7408 74.08%
skin sensitisation - 0.9420 94.20%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.8149 81.49%
Acute Oral Toxicity (c) I 0.8185 81.85%
Estrogen receptor binding + 0.6230 62.30%
Androgen receptor binding + 0.7452 74.52%
Thyroid receptor binding - 0.5905 59.05%
Glucocorticoid receptor binding - 0.4809 48.09%
Aromatase binding + 0.6717 67.17%
PPAR gamma + 0.6354 63.54%
Honey bee toxicity - 0.5808 58.08%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5800 58.00%
Fish aquatic toxicity + 0.7523 75.23%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL218 P21554 Cannabinoid CB1 receptor 98.03% 96.61%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.81% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.07% 85.14%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.78% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.60% 91.11%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 94.13% 89.05%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.09% 97.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 93.12% 100.00%
CHEMBL226 P30542 Adenosine A1 receptor 92.71% 95.93%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 92.47% 96.21%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 91.93% 95.50%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 90.72% 92.86%
CHEMBL237 P41145 Kappa opioid receptor 89.23% 98.10%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 88.34% 95.89%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 86.75% 91.24%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 86.34% 100.00%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 86.30% 97.86%
CHEMBL221 P23219 Cyclooxygenase-1 85.91% 90.17%
CHEMBL1871 P10275 Androgen Receptor 84.72% 96.43%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 84.60% 96.77%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.49% 94.45%
CHEMBL259 P32245 Melanocortin receptor 4 84.30% 95.38%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.67% 95.89%
CHEMBL241 Q14432 Phosphodiesterase 3A 83.60% 92.94%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 82.32% 96.67%
CHEMBL5255 O00206 Toll-like receptor 4 82.31% 92.50%
CHEMBL204 P00734 Thrombin 81.31% 96.01%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 80.82% 95.83%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 80.55% 97.33%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Allium giganteum

Cross-Links

Top
PubChem 162979413
LOTUS LTS0202010
wikiData Q105326053