5-hydroxy-2-(hydroxymethyl)-9-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]-8,11-dihydropyrano[2,3-g][1]benzoxepin-4-one

Details

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Internal ID 97f779c3-e67d-453c-9bb9-158f6fcd3c00
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name 5-hydroxy-2-(hydroxymethyl)-9-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]-8,11-dihydropyrano[2,3-g][1]benzoxepin-4-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C21H24O11/c22-5-10-3-12(24)16-13(25)4-14-11(20(16)31-10)2-1-9(7-29-14)8-30-21-19(28)18(27)17(26)15(6-23)32-21/h1,3-4,15,17-19,21-23,25-28H,2,5-8H2/t15-,17-,18+,19-,21-/m1/s1
InChI Key KXDYPPVOPZKXMX-PEVLUNPASA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C21H24O11
Molecular Weight 452.40 g/mol
Exact Mass 452.13186158 g/mol
Topological Polar Surface Area (TPSA) 175.00 Ų
XlogP -1.40
Atomic LogP (AlogP) -1.33
H-Bond Acceptor 11
H-Bond Donor 6
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 5-hydroxy-2-(hydroxymethyl)-9-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]-8,11-dihydropyrano[2,3-g][1]benzoxepin-4-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6223 62.23%
Caco-2 - 0.8992 89.92%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.8714 87.14%
Subcellular localzation Mitochondria 0.6036 60.36%
OATP2B1 inhibitior - 0.5680 56.80%
OATP1B1 inhibitior + 0.9059 90.59%
OATP1B3 inhibitior + 0.9552 95.52%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior + 0.7434 74.34%
P-glycoprotein inhibitior - 0.5986 59.86%
P-glycoprotein substrate - 0.6908 69.08%
CYP3A4 substrate + 0.6213 62.13%
CYP2C9 substrate - 0.8245 82.45%
CYP2D6 substrate - 0.8397 83.97%
CYP3A4 inhibition - 0.8646 86.46%
CYP2C9 inhibition - 0.8971 89.71%
CYP2C19 inhibition - 0.6415 64.15%
CYP2D6 inhibition - 0.8302 83.02%
CYP1A2 inhibition - 0.8066 80.66%
CYP2C8 inhibition + 0.4875 48.75%
CYP inhibitory promiscuity - 0.7530 75.30%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.7276 72.76%
Eye corrosion - 0.9893 98.93%
Eye irritation - 0.9058 90.58%
Skin irritation - 0.8047 80.47%
Skin corrosion - 0.9572 95.72%
Ames mutagenesis + 0.6500 65.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4300 43.00%
Micronuclear - 0.5400 54.00%
Hepatotoxicity - 0.7447 74.47%
skin sensitisation - 0.8071 80.71%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.7778 77.78%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity + 0.4703 47.03%
Acute Oral Toxicity (c) III 0.3889 38.89%
Estrogen receptor binding + 0.7619 76.19%
Androgen receptor binding + 0.7533 75.33%
Thyroid receptor binding - 0.4909 49.09%
Glucocorticoid receptor binding - 0.4654 46.54%
Aromatase binding + 0.6460 64.60%
PPAR gamma + 0.7725 77.25%
Honey bee toxicity - 0.6849 68.49%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.6700 67.00%
Fish aquatic toxicity + 0.9800 98.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.64% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.68% 89.00%
CHEMBL2581 P07339 Cathepsin D 92.55% 98.95%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 92.12% 89.67%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.52% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.32% 95.56%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 87.98% 94.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.92% 97.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.92% 99.17%
CHEMBL3401 O75469 Pregnane X receptor 85.50% 94.73%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.64% 100.00%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 82.08% 96.21%
CHEMBL3194 P02766 Transthyretin 82.06% 90.71%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.05% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.00% 86.33%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 80.24% 95.83%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Eranthis hyemalis

Cross-Links

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PubChem 14034916
LOTUS LTS0100942
wikiData Q105147286