(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(3S,5R,7S,8R,9R,10S,13R,14R,17S)-7-hydroxy-4,4,8,10,14-pentamethyl-17-[(2S)-6-methyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhept-5-en-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxane-3,4,5-triol

Details

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Internal ID 8570d7cc-a680-4a91-9e32-2335624498cc
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(3S,5R,7S,8R,9R,10S,13R,14R,17S)-7-hydroxy-4,4,8,10,14-pentamethyl-17-[(2S)-6-methyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhept-5-en-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxane-3,4,5-triol
SMILES (Canonical) CC(=CCCC(C)(C1CCC2(C1CCC3C2(C(CC4C3(CCC(C4(C)C)OC5C(C(C(C(O5)CO)O)O)O)C)O)C)C)OC6C(C(C(C(O6)CO)O)O)O)C
SMILES (Isomeric) CC(=CCC[C@@](C)([C@H]1CC[C@@]2([C@@H]1CC[C@H]3[C@]2([C@H](C[C@@H]4[C@@]3(CC[C@@H](C4(C)C)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)C)O)C)C)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)C
InChI InChI=1S/C42H72O13/c1-21(2)10-9-15-41(7,55-37-35(51)33(49)31(47)25(20-44)53-37)23-13-17-40(6)22(23)11-12-26-39(5)16-14-29(38(3,4)27(39)18-28(45)42(26,40)8)54-36-34(50)32(48)30(46)24(19-43)52-36/h10,22-37,43-51H,9,11-20H2,1-8H3/t22-,23+,24-,25-,26-,27+,28+,29+,30-,31-,32+,33+,34-,35-,36+,37+,39-,40-,41+,42+/m1/s1
InChI Key OSMTYFWKFPGPRH-JMEMVLOCSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C42H72O13
Molecular Weight 785.00 g/mol
Exact Mass 784.49729235 g/mol
Topological Polar Surface Area (TPSA) 219.00 Ų
XlogP 4.00
Atomic LogP (AlogP) 2.15
H-Bond Acceptor 13
H-Bond Donor 9
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(3S,5R,7S,8R,9R,10S,13R,14R,17S)-7-hydroxy-4,4,8,10,14-pentamethyl-17-[(2S)-6-methyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhept-5-en-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6877 68.77%
Caco-2 - 0.8812 88.12%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.7251 72.51%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8112 81.12%
OATP1B3 inhibitior + 0.8189 81.89%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior - 0.6353 63.53%
P-glycoprotein inhibitior + 0.8054 80.54%
P-glycoprotein substrate - 0.7779 77.79%
CYP3A4 substrate + 0.7150 71.50%
CYP2C9 substrate - 0.8025 80.25%
CYP2D6 substrate - 0.8264 82.64%
CYP3A4 inhibition - 0.9502 95.02%
CYP2C9 inhibition - 0.8671 86.71%
CYP2C19 inhibition - 0.9036 90.36%
CYP2D6 inhibition - 0.9380 93.80%
CYP1A2 inhibition - 0.9057 90.57%
CYP2C8 inhibition + 0.6381 63.81%
CYP inhibitory promiscuity - 0.9413 94.13%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6474 64.74%
Eye corrosion - 0.9907 99.07%
Eye irritation - 0.9100 91.00%
Skin irritation - 0.5956 59.56%
Skin corrosion - 0.9488 94.88%
Ames mutagenesis - 0.7070 70.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7840 78.40%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.5250 52.50%
skin sensitisation - 0.8991 89.91%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity - 0.8000 80.00%
Acute Oral Toxicity (c) I 0.5677 56.77%
Estrogen receptor binding + 0.7204 72.04%
Androgen receptor binding + 0.7415 74.15%
Thyroid receptor binding - 0.5654 56.54%
Glucocorticoid receptor binding + 0.6458 64.58%
Aromatase binding + 0.6813 68.13%
PPAR gamma + 0.7298 72.98%
Honey bee toxicity - 0.5748 57.48%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.9172 91.72%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 96.62% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.22% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.53% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.01% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.92% 100.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 87.49% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.24% 86.33%
CHEMBL218 P21554 Cannabinoid CB1 receptor 86.84% 96.61%
CHEMBL259 P32245 Melanocortin receptor 4 86.52% 95.38%
CHEMBL241 Q14432 Phosphodiesterase 3A 85.44% 92.94%
CHEMBL2996 Q05655 Protein kinase C delta 84.31% 97.79%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 84.21% 100.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 84.02% 95.50%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 83.57% 91.24%
CHEMBL206 P03372 Estrogen receptor alpha 83.26% 97.64%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.58% 97.14%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.20% 100.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.84% 94.45%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.65% 99.17%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.51% 92.62%
CHEMBL4227 P25090 Lipoxin A4 receptor 81.29% 100.00%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 80.51% 95.71%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 80.14% 93.04%
CHEMBL5555 O00767 Acyl-CoA desaturase 80.06% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Luffa operculata

Cross-Links

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PubChem 14286733
LOTUS LTS0216804
wikiData Q105199123