(2S,3R,4S,5S,6R)-2-[(2R,3R,4R,5R,6R)-4,5-dihydroxy-2-(hydroxymethyl)-6-[(1R,2S,4S,5'R,6R,7S,8R,9S,12S,13S,15S,16R,18R)-15-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxyoxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID b4d8b27b-765a-43f9-905b-62df64803c9d
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,3R,4S,5S,6R)-2-[(2R,3R,4R,5R,6R)-4,5-dihydroxy-2-(hydroxymethyl)-6-[(1R,2S,4S,5'R,6R,7S,8R,9S,12S,13S,15S,16R,18R)-15-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxyoxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CCC6C5(CC(C(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)CO)O)O)O)O)O)O)C)C)C)OC1
SMILES (Isomeric) C[C@@H]1CC[C@@]2([C@H]([C@H]3[C@@H](O2)C[C@@H]4[C@@]3(CC[C@H]5[C@H]4CC[C@H]6[C@@]5(C[C@@H]([C@@H](C6)O[C@H]7[C@@H]([C@H]([C@H]([C@H](O7)CO)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO)O)O)O)O)O)O)C)C)C)OC1
InChI InChI=1S/C39H64O14/c1-17-7-10-39(48-16-17)18(2)28-25(53-39)12-22-20-6-5-19-11-24(23(42)13-38(19,4)21(20)8-9-37(22,28)3)49-35-33(47)31(45)34(27(15-41)51-35)52-36-32(46)30(44)29(43)26(14-40)50-36/h17-36,40-47H,5-16H2,1-4H3/t17-,18+,19-,20-,21+,22+,23+,24-,25+,26-,27-,28+,29-,30+,31-,32-,33-,34+,35-,36+,37+,38+,39-/m1/s1
InChI Key BOFSXGGSAUTBNA-LORAHHELSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C39H64O14
Molecular Weight 756.90 g/mol
Exact Mass 756.42960671 g/mol
Topological Polar Surface Area (TPSA) 217.00 Ų
XlogP 1.80
Atomic LogP (AlogP) 0.41
H-Bond Acceptor 14
H-Bond Donor 8
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4S,5S,6R)-2-[(2R,3R,4R,5R,6R)-4,5-dihydroxy-2-(hydroxymethyl)-6-[(1R,2S,4S,5'R,6R,7S,8R,9S,12S,13S,15S,16R,18R)-15-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxyoxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5246 52.46%
Caco-2 - 0.8823 88.23%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6174 61.74%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9031 90.31%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior + 0.6250 62.50%
BSEP inhibitior - 0.7528 75.28%
P-glycoprotein inhibitior + 0.6980 69.80%
P-glycoprotein substrate - 0.8264 82.64%
CYP3A4 substrate + 0.7462 74.62%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8164 81.64%
CYP3A4 inhibition - 0.9473 94.73%
CYP2C9 inhibition - 0.9215 92.15%
CYP2C19 inhibition - 0.8997 89.97%
CYP2D6 inhibition - 0.9561 95.61%
CYP1A2 inhibition - 0.9215 92.15%
CYP2C8 inhibition + 0.6249 62.49%
CYP inhibitory promiscuity - 0.9616 96.16%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6223 62.23%
Eye corrosion - 0.9917 99.17%
Eye irritation - 0.9173 91.73%
Skin irritation - 0.6555 65.55%
Skin corrosion - 0.9521 95.21%
Ames mutagenesis - 0.8670 86.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7263 72.63%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.9125 91.25%
skin sensitisation - 0.9420 94.20%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.8293 82.93%
Acute Oral Toxicity (c) I 0.8185 81.85%
Estrogen receptor binding + 0.7537 75.37%
Androgen receptor binding + 0.6975 69.75%
Thyroid receptor binding - 0.6265 62.65%
Glucocorticoid receptor binding - 0.5232 52.32%
Aromatase binding + 0.6473 64.73%
PPAR gamma + 0.6588 65.88%
Honey bee toxicity - 0.5091 50.91%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.7523 75.23%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.34% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.99% 91.11%
CHEMBL218 P21554 Cannabinoid CB1 receptor 95.98% 96.61%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.71% 97.09%
CHEMBL237 P41145 Kappa opioid receptor 93.45% 98.10%
CHEMBL1994 P08235 Mineralocorticoid receptor 92.70% 100.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 92.20% 95.50%
CHEMBL233 P35372 Mu opioid receptor 92.09% 97.93%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 91.23% 96.21%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 90.65% 92.86%
CHEMBL226 P30542 Adenosine A1 receptor 89.75% 95.93%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 88.82% 97.86%
CHEMBL204 P00734 Thrombin 88.00% 96.01%
CHEMBL253 P34972 Cannabinoid CB2 receptor 87.96% 97.25%
CHEMBL5255 O00206 Toll-like receptor 4 87.75% 92.50%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 87.13% 89.05%
CHEMBL259 P32245 Melanocortin receptor 4 87.07% 95.38%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.03% 95.89%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 85.70% 95.58%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 85.35% 100.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 85.29% 95.89%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 84.36% 96.38%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.31% 94.45%
CHEMBL3922 P50579 Methionine aminopeptidase 2 83.74% 97.28%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 83.21% 97.31%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 83.06% 86.92%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 82.08% 96.67%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 80.95% 96.77%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 80.95% 95.83%
CHEMBL4370 P16662 UDP-glucuronosyltransferase 2B7 80.91% 100.00%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 80.65% 97.29%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 80.26% 100.00%
CHEMBL2095194 P08709 Coagulation factor VII/tissue factor 80.22% 99.17%
CHEMBL241 Q14432 Phosphodiesterase 3A 80.04% 92.94%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Agave utahensis
Citrus maxima

Cross-Links

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PubChem 44255145
LOTUS LTS0246865
wikiData Q104985966