Dimethyl lithospermate B

Details

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Internal ID e10bff85-5746-4b1f-98c5-ea3d77fe9fa6
Taxonomy Phenylpropanoids and polyketides > 2-arylbenzofuran flavonoids
IUPAC Name [(2R)-3-(3,4-dihydroxyphenyl)-1-methoxy-1-oxopropan-2-yl] (2S,3S)-2-(3,4-dihydroxyphenyl)-4-[(E)-3-[(2R)-3-(3,4-dihydroxyphenyl)-1-methoxy-1-oxopropan-2-yl]oxy-3-oxoprop-1-enyl]-7-hydroxy-2,3-dihydro-1-benzofuran-3-carboxylate
SMILES (Canonical) COC(=O)C(CC1=CC(=C(C=C1)O)O)OC(=O)C=CC2=C3C(C(OC3=C(C=C2)O)C4=CC(=C(C=C4)O)O)C(=O)OC(CC5=CC(=C(C=C5)O)O)C(=O)OC
SMILES (Isomeric) COC(=O)[C@@H](CC1=CC(=C(C=C1)O)O)OC(=O)/C=C/C2=C3[C@@H]([C@H](OC3=C(C=C2)O)C4=CC(=C(C=C4)O)O)C(=O)O[C@H](CC5=CC(=C(C=C5)O)O)C(=O)OC
InChI InChI=1S/C38H34O16/c1-50-36(47)29(15-18-3-8-22(39)26(43)13-18)52-31(46)12-7-20-5-11-25(42)35-32(20)33(34(54-35)21-6-10-24(41)28(45)17-21)38(49)53-30(37(48)51-2)16-19-4-9-23(40)27(44)14-19/h3-14,17,29-30,33-34,39-45H,15-16H2,1-2H3/b12-7+/t29-,30-,33+,34-/m1/s1
InChI Key DHYLGBJCEGEBGQ-QHIXFNMVSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C38H34O16
Molecular Weight 746.70 g/mol
Exact Mass 746.18468499 g/mol
Topological Polar Surface Area (TPSA) 256.00 Ų
XlogP 4.60
Atomic LogP (AlogP) 3.51
H-Bond Acceptor 16
H-Bond Donor 7
Rotatable Bonds 12

Synonyms

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Dimethyl lithospermate B
875313-64-7
HY-N6868
AKOS040759359
AC-34161
MS-31305
CS-0027920
(2S)-2alpha-(3,4-Dihydroxyphenyl)-4-[(E)-3-[(R)-1-(methoxycarbonyl)-2-(3,4-dihydroxyphenyl)ethoxy]-3-oxo-1-propenyl]-7-hydroxy-2,3-dihydrobenzofuran-3beta-carboxylic acid (R)-1-(methoxycarbonyl)-2-(3,4-dihydroxyphenyl)ethyl ester
[(2R)-3-(3,4-Dihydroxyphenyl)-1-methoxy-1-oxopropan-2-yl] (2S,3S)-2-(3,4-dihydroxyphenyl)-4-[(E)-3-[(2R)-3-(3,4-dihydroxyphenyl)-1-methoxy-1-oxopropan-2-yl]oxy-3-oxoprop-1-enyl]-7-hydroxy-2,3-dihydro-1-benzofuran-3-carboxylate

2D Structure

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2D Structure of Dimethyl lithospermate B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9244 92.44%
Caco-2 - 0.8697 86.97%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.7452 74.52%
OATP2B1 inhibitior + 0.5674 56.74%
OATP1B1 inhibitior + 0.8764 87.64%
OATP1B3 inhibitior + 0.8961 89.61%
MATE1 inhibitior - 0.7000 70.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.8452 84.52%
P-glycoprotein inhibitior + 0.7654 76.54%
P-glycoprotein substrate - 0.5429 54.29%
CYP3A4 substrate + 0.6707 67.07%
CYP2C9 substrate - 0.8038 80.38%
CYP2D6 substrate - 0.8225 82.25%
CYP3A4 inhibition - 0.6049 60.49%
CYP2C9 inhibition + 0.7664 76.64%
CYP2C19 inhibition + 0.5193 51.93%
CYP2D6 inhibition - 0.8585 85.85%
CYP1A2 inhibition - 0.6593 65.93%
CYP2C8 inhibition + 0.7435 74.35%
CYP inhibitory promiscuity + 0.6853 68.53%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9843 98.43%
Carcinogenicity (trinary) Danger 0.4417 44.17%
Eye corrosion - 0.9910 99.10%
Eye irritation - 0.9078 90.78%
Skin irritation - 0.8017 80.17%
Skin corrosion - 0.9396 93.96%
Ames mutagenesis - 0.5054 50.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7335 73.35%
Micronuclear + 0.7759 77.59%
Hepatotoxicity - 0.7875 78.75%
skin sensitisation - 0.8399 83.99%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.7750 77.50%
Nephrotoxicity - 0.8032 80.32%
Acute Oral Toxicity (c) I 0.3397 33.97%
Estrogen receptor binding + 0.8046 80.46%
Androgen receptor binding + 0.8212 82.12%
Thyroid receptor binding + 0.5604 56.04%
Glucocorticoid receptor binding + 0.7048 70.48%
Aromatase binding + 0.5357 53.57%
PPAR gamma + 0.6817 68.17%
Honey bee toxicity - 0.6196 61.96%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity + 0.5700 57.00%
Fish aquatic toxicity + 0.9895 98.95%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.52% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 98.37% 91.49%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.52% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.01% 94.45%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 91.56% 96.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.23% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.49% 86.33%
CHEMBL2581 P07339 Cathepsin D 90.20% 98.95%
CHEMBL340 P08684 Cytochrome P450 3A4 89.17% 91.19%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.90% 99.17%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.74% 89.00%
CHEMBL3401 O75469 Pregnane X receptor 85.03% 94.73%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 83.27% 95.50%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 82.27% 95.71%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 80.44% 85.14%
CHEMBL2535 P11166 Glucose transporter 80.34% 98.75%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Arnebia guttata
Salvia przewalskii

Cross-Links

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PubChem 11422787
NPASS NPC11467
LOTUS LTS0154506
wikiData Q104888554