Dihydroxybergamottin

Details

Top
Internal ID 655d60e7-c263-4274-a791-5deab9484fd1
Taxonomy Phenylpropanoids and polyketides > Coumarins and derivatives > Furanocoumarins > Psoralens
IUPAC Name 4-[(E,6R)-6,7-dihydroxy-3,7-dimethyloct-2-enoxy]furo[3,2-g]chromen-7-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C21H24O6/c1-13(4-6-18(22)21(2,3)24)8-10-26-20-14-5-7-19(23)27-17(14)12-16-15(20)9-11-25-16/h5,7-9,11-12,18,22,24H,4,6,10H2,1-3H3/b13-8+/t18-/m1/s1
InChI Key IXZUPBUEKFXTSD-INMULRNOSA-N
Popularity 39 references in papers

Physical and Chemical Properties

Top
Molecular Formula C21H24O6
Molecular Weight 372.40 g/mol
Exact Mass 372.15728848 g/mol
Topological Polar Surface Area (TPSA) 89.10 Ų
XlogP 3.40
Atomic LogP (AlogP) 3.78
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 7

Synonyms

Top
264234-05-1
Dihydroxybergamottin, (+)-
(R)-17,18-Dihydroxybergamottin
S2O194AWTV
7H-Furo(3,2-g)(1)benzopyran-7-one, 4-(((2E,6R)-6,7-dihydroxy-3,7-dimethyl-2-octen-1-yl)oxy)-
7H-Furo[3,2-g][1]benzopyran-7-one, 4-[[(2E,6R)-6,7-dihydroxy-3,7-dimethyl-2-octen-1-yl]oxy]-
RefChem:937917
GlyTouCan:G50613YF
G50613YF
(R)-6',7'-Dihydroxybergamottin
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

Top
2D Structure of Dihydroxybergamottin

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9688 96.88%
Caco-2 - 0.6235 62.35%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability + 0.6000 60.00%
Subcellular localzation Mitochondria 0.8602 86.02%
OATP2B1 inhibitior - 0.8601 86.01%
OATP1B1 inhibitior + 0.9064 90.64%
OATP1B3 inhibitior + 0.8516 85.16%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior + 0.9629 96.29%
P-glycoprotein inhibitior + 0.6207 62.07%
P-glycoprotein substrate - 0.6195 61.95%
CYP3A4 substrate + 0.5815 58.15%
CYP2C9 substrate - 0.8170 81.70%
CYP2D6 substrate - 0.8130 81.30%
CYP3A4 inhibition - 0.6863 68.63%
CYP2C9 inhibition - 0.6545 65.45%
CYP2C19 inhibition - 0.6596 65.96%
CYP2D6 inhibition - 0.8016 80.16%
CYP1A2 inhibition - 0.5397 53.97%
CYP2C8 inhibition - 0.5620 56.20%
CYP inhibitory promiscuity - 0.8194 81.94%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5304 53.04%
Eye corrosion - 0.9915 99.15%
Eye irritation - 0.9481 94.81%
Skin irritation - 0.6432 64.32%
Skin corrosion - 0.9484 94.84%
Ames mutagenesis - 0.5700 57.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8948 89.48%
Micronuclear - 0.7300 73.00%
Hepatotoxicity + 0.7250 72.50%
skin sensitisation - 0.8496 84.96%
Respiratory toxicity + 0.7111 71.11%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.6750 67.50%
Nephrotoxicity - 0.9149 91.49%
Acute Oral Toxicity (c) I 0.5434 54.34%
Estrogen receptor binding + 0.8468 84.68%
Androgen receptor binding + 0.8148 81.48%
Thyroid receptor binding + 0.6722 67.22%
Glucocorticoid receptor binding + 0.8264 82.64%
Aromatase binding + 0.7096 70.96%
PPAR gamma + 0.8935 89.35%
Honey bee toxicity - 0.7823 78.23%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.6700 67.00%
Fish aquatic toxicity + 0.9959 99.59%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL340 P08684 Cytochrome P450 3A4 810 nM
1580 nM
IC50
IC50
PMID: 22342630
PMID: 19689106

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.42% 91.11%
CHEMBL2581 P07339 Cathepsin D 97.63% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 95.92% 94.73%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.24% 89.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 93.78% 99.17%
CHEMBL2039 P27338 Monoamine oxidase B 92.97% 92.51%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.23% 94.45%
CHEMBL4306 P22460 Voltage-gated potassium channel subunit Kv1.5 90.55% 94.03%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 88.94% 85.14%
CHEMBL1951 P21397 Monoamine oxidase A 87.91% 91.49%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.79% 95.56%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 86.97% 89.34%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 85.44% 96.00%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 83.90% 93.65%
CHEMBL3359 P21462 Formyl peptide receptor 1 82.70% 93.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.69% 86.33%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Citrus hystrix

Cross-Links

Top
PubChem 12082365
NPASS NPC49009
ChEMBL CHEMBL1079119
LOTUS LTS0223001
wikiData Q27138812