(2R,3R,4S,5S,6R)-2-[4-[(1R,2S,4S,6S,7S,8R,9S,10R,12S,13S,16S,18R)-16-[(2R,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-6,10-dihydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-6-yl]-2-methylidenebutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID 7d5a9110-6815-4c88-8eda-a1fd785b6656
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2R,3R,4S,5S,6R)-2-[4-[(1R,2S,4S,6S,7S,8R,9S,10R,12S,13S,16S,18R)-16-[(2R,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-6,10-dihydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-6-yl]-2-methylidenebutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC1C2C(CC3C2(C(CC4C3CCC5C4(CCC(C5)OC6C(C(C(C(O6)CO)O)O)OC7C(C(C(C(O7)CO)O)O)O)C)O)C)OC1(CCC(=C)COC8C(C(C(C(O8)CO)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@H]2[C@H](C[C@@H]3[C@@]2([C@@H](C[C@H]4[C@H]3CC[C@H]5[C@@]4(CC[C@@H](C5)O[C@H]6[C@@H]([C@H]([C@H]([C@H](O6)CO)O)O)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O)C)O)C)O[C@]1(CCC(=C)CO[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO)O)O)O)O
InChI InChI=1S/C45H74O20/c1-18(17-59-40-37(56)34(53)31(50)26(14-46)61-40)7-10-45(58)19(2)30-25(65-45)12-24-22-6-5-20-11-21(8-9-43(20,3)23(22)13-29(49)44(24,30)4)60-42-39(36(55)33(52)28(16-48)63-42)64-41-38(57)35(54)32(51)27(15-47)62-41/h19-42,46-58H,1,5-17H2,2-4H3/t19-,20+,21-,22+,23-,24-,25-,26+,27+,28+,29+,30-,31+,32+,33-,34-,35-,36-,37+,38+,39+,40+,41-,42+,43-,44+,45-/m0/s1
InChI Key KHMNHEWRQXPLNO-YLNXRWKUSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C45H74O20
Molecular Weight 935.10 g/mol
Exact Mass 934.47734475 g/mol
Topological Polar Surface Area (TPSA) 328.00 Ų
XlogP -0.60
Atomic LogP (AlogP) -2.89
H-Bond Acceptor 20
H-Bond Donor 13
Rotatable Bonds 13

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3R,4S,5S,6R)-2-[4-[(1R,2S,4S,6S,7S,8R,9S,10R,12S,13S,16S,18R)-16-[(2R,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-6,10-dihydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-6-yl]-2-methylidenebutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6654 66.54%
Caco-2 - 0.8862 88.62%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6422 64.22%
OATP2B1 inhibitior - 0.8700 87.00%
OATP1B1 inhibitior + 0.8880 88.80%
OATP1B3 inhibitior + 0.9222 92.22%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior + 0.6480 64.80%
P-glycoprotein inhibitior + 0.7389 73.89%
P-glycoprotein substrate + 0.5738 57.38%
CYP3A4 substrate + 0.7425 74.25%
CYP2C9 substrate - 0.8020 80.20%
CYP2D6 substrate - 0.8336 83.36%
CYP3A4 inhibition - 0.9082 90.82%
CYP2C9 inhibition - 0.9013 90.13%
CYP2C19 inhibition - 0.8950 89.50%
CYP2D6 inhibition - 0.9360 93.60%
CYP1A2 inhibition - 0.8969 89.69%
CYP2C8 inhibition + 0.6770 67.70%
CYP inhibitory promiscuity - 0.9312 93.12%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6013 60.13%
Eye corrosion - 0.9894 98.94%
Eye irritation - 0.9074 90.74%
Skin irritation + 0.5000 50.00%
Skin corrosion - 0.9412 94.12%
Ames mutagenesis - 0.6913 69.13%
Human Ether-a-go-go-Related Gene inhibition + 0.8288 82.88%
Micronuclear - 0.9000 90.00%
Hepatotoxicity - 0.8093 80.93%
skin sensitisation - 0.9084 90.84%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.5500 55.00%
Nephrotoxicity - 0.8407 84.07%
Acute Oral Toxicity (c) I 0.7360 73.60%
Estrogen receptor binding + 0.7912 79.12%
Androgen receptor binding + 0.6702 67.02%
Thyroid receptor binding - 0.5518 55.18%
Glucocorticoid receptor binding + 0.6095 60.95%
Aromatase binding + 0.6740 67.40%
PPAR gamma + 0.7424 74.24%
Honey bee toxicity - 0.5947 59.47%
Biodegradation - 0.6000 60.00%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.9517 95.17%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.44% 91.11%
CHEMBL233 P35372 Mu opioid receptor 96.98% 97.93%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.90% 96.09%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 96.26% 96.21%
CHEMBL220 P22303 Acetylcholinesterase 93.74% 94.45%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 93.69% 89.05%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.86% 97.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 92.55% 96.61%
CHEMBL237 P41145 Kappa opioid receptor 91.74% 98.10%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.53% 100.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.23% 94.45%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 88.01% 95.50%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.06% 86.33%
CHEMBL253 P34972 Cannabinoid CB2 receptor 86.94% 97.25%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 86.92% 96.77%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 85.08% 91.24%
CHEMBL5255 O00206 Toll-like receptor 4 84.18% 92.50%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.88% 95.89%
CHEMBL2094135 Q96BI3 Gamma-secretase 83.14% 98.05%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 82.95% 98.46%
CHEMBL2996 Q05655 Protein kinase C delta 82.83% 97.79%
CHEMBL4581 P52732 Kinesin-like protein 1 82.60% 93.18%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 82.57% 96.38%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 81.98% 97.50%
CHEMBL1871 P10275 Androgen Receptor 81.72% 96.43%
CHEMBL241 Q14432 Phosphodiesterase 3A 81.66% 92.94%
CHEMBL226 P30542 Adenosine A1 receptor 81.61% 95.93%
CHEMBL4370 P16662 UDP-glucuronosyltransferase 2B7 80.92% 100.00%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 80.65% 93.10%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Allium macrostemon

Cross-Links

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PubChem 163007010
LOTUS LTS0000024
wikiData Q105141226