Deoxyloganin

Details

Top
Internal ID de81d2b3-95cf-4d74-a0e5-6d734526da97
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name methyl (1S,4aS,7S,7aR)-7-methyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate
SMILES (Canonical) CC1CCC2C1C(OC=C2C(=O)OC)OC3C(C(C(C(O3)CO)O)O)O
SMILES (Isomeric) C[C@H]1CC[C@H]2[C@@H]1[C@@H](OC=C2C(=O)OC)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O
InChI InChI=1S/C17H26O9/c1-7-3-4-8-9(15(22)23-2)6-24-16(11(7)8)26-17-14(21)13(20)12(19)10(5-18)25-17/h6-8,10-14,16-21H,3-5H2,1-2H3/t7-,8+,10+,11+,12+,13-,14+,16-,17-/m0/s1
InChI Key KMHXLGLJTQHEIM-OUEWTLASSA-N
Popularity 144 references in papers

Physical and Chemical Properties

Top
Molecular Formula C17H26O9
Molecular Weight 374.40 g/mol
Exact Mass 374.15768240 g/mol
Topological Polar Surface Area (TPSA) 135.00 Ų
XlogP 0.00
Atomic LogP (AlogP) -1.12
H-Bond Acceptor 9
H-Bond Donor 4
Rotatable Bonds 4

Synonyms

Top
7-Deoxyloganin
26660-57-1
methyl (1S,4aS,7S,7aR)-7-methyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate
C06071
CHEBI:18370
DTXSID10331539
LMPR0102070005
Q27103035
Cyclopenta[c]pyran-4-carboxylic acid, 1-(.beta.-D-glucopyranosyloxy)-1,4a,5,6,7,7a-hexahydro-7-methyl-, methyl ester, [1S-(1.alpha.,4a.alpha.,7.alpha.,7a.alpha.)]-
Cyclopenta[c]pyran-4-carboxylic acid, 1.alpha.-(.beta.-D-glucopyranosyloxy)-1,4a.alpha.,5,6,7,7a.alpha.-hexahydro-7.alpha.-methyl-, methyl ester
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

Top
2D Structure of Deoxyloganin

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6667 66.67%
Caco-2 - 0.8040 80.40%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.7217 72.17%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7237 72.37%
OATP1B3 inhibitior + 0.9237 92.37%
MATE1 inhibitior - 0.9412 94.12%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.9269 92.69%
P-glycoprotein inhibitior - 0.8740 87.40%
P-glycoprotein substrate - 0.8023 80.23%
CYP3A4 substrate + 0.5872 58.72%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8671 86.71%
CYP3A4 inhibition - 0.9145 91.45%
CYP2C9 inhibition - 0.8847 88.47%
CYP2C19 inhibition - 0.8854 88.54%
CYP2D6 inhibition - 0.8881 88.81%
CYP1A2 inhibition - 0.8035 80.35%
CYP2C8 inhibition - 0.6372 63.72%
CYP inhibitory promiscuity - 0.7988 79.88%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7230 72.30%
Eye corrosion - 0.9890 98.90%
Eye irritation - 0.9772 97.72%
Skin irritation - 0.6969 69.69%
Skin corrosion - 0.9424 94.24%
Ames mutagenesis - 0.6124 61.24%
Human Ether-a-go-go-Related Gene inhibition - 0.5000 50.00%
Micronuclear - 0.8500 85.00%
Hepatotoxicity - 0.7250 72.50%
skin sensitisation - 0.8924 89.24%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity + 0.4558 45.58%
Acute Oral Toxicity (c) III 0.4896 48.96%
Estrogen receptor binding + 0.5314 53.14%
Androgen receptor binding - 0.5000 50.00%
Thyroid receptor binding - 0.5429 54.29%
Glucocorticoid receptor binding - 0.6586 65.86%
Aromatase binding - 0.6939 69.39%
PPAR gamma - 0.5569 55.69%
Honey bee toxicity - 0.9043 90.43%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.7400 74.00%
Fish aquatic toxicity + 0.7135 71.35%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.89% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.97% 91.11%
CHEMBL4040 P28482 MAP kinase ERK2 96.67% 83.82%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.70% 97.09%
CHEMBL2581 P07339 Cathepsin D 90.65% 98.95%
CHEMBL5255 O00206 Toll-like receptor 4 87.60% 92.50%
CHEMBL218 P21554 Cannabinoid CB1 receptor 84.43% 96.61%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.40% 99.17%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.14% 96.00%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 83.11% 94.80%
CHEMBL3401 O75469 Pregnane X receptor 81.88% 94.73%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 81.29% 85.14%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 80.58% 94.33%
CHEMBL5028 O14672 ADAM10 80.00% 97.50%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.00% 86.33%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Catalpa ovata
Strychnos nux-vomica
Tectona grandis
Verbena officinalis

Cross-Links

Top
PubChem 440906
NPASS NPC264249
LOTUS LTS0147691
wikiData Q27103035