Delphinidin-3-O-sambubioside

Details

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Internal ID e682a4c8-21bd-45de-8fd1-2c76ac68b3a2
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Anthocyanins > Anthocyanidin-3-O-glycosides
IUPAC Name 2-[2-[5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)chromenylium-3-yl]oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxyoxane-3,4,5-triol
SMILES (Canonical) C1C(C(C(C(O1)OC2C(C(C(OC2OC3=CC4=C(C=C(C=C4[O+]=C3C5=CC(=C(C(=C5)O)O)O)O)O)CO)O)O)O)O)O
SMILES (Isomeric) C1C(C(C(C(O1)OC2C(C(C(OC2OC3=CC4=C(C=C(C=C4[O+]=C3C5=CC(=C(C(=C5)O)O)O)O)O)CO)O)O)O)O)O
InChI InChI=1S/C26H28O16/c27-6-17-20(35)21(36)24(42-25-22(37)19(34)14(32)7-38-25)26(41-17)40-16-5-10-11(29)3-9(28)4-15(10)39-23(16)8-1-12(30)18(33)13(31)2-8/h1-5,14,17,19-22,24-27,32,34-37H,6-7H2,(H4-,28,29,30,31,33)/p+1
InChI Key TWYYVOVDSNRIJM-UHFFFAOYSA-O
Popularity 19 references in papers

Physical and Chemical Properties

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Molecular Formula C26H29O16+
Molecular Weight 597.50 g/mol
Exact Mass 597.14555983 g/mol
Topological Polar Surface Area (TPSA) 260.00 Ų
XlogP 0.00
Atomic LogP (AlogP) -1.45
H-Bond Acceptor 15
H-Bond Donor 11
Rotatable Bonds 6

Synonyms

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Delphinidin 3-sambubioside
Delphinidin 3-O-sambubioside
DTXSID401341522
PD161373

2D Structure

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2D Structure of Delphinidin-3-O-sambubioside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8094 80.94%
Caco-2 - 0.9210 92.10%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Nucleus 0.4922 49.22%
OATP2B1 inhibitior - 0.5576 55.76%
OATP1B1 inhibitior + 0.8742 87.42%
OATP1B3 inhibitior + 0.9359 93.59%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.5993 59.93%
P-glycoprotein inhibitior - 0.5521 55.21%
P-glycoprotein substrate - 0.6107 61.07%
CYP3A4 substrate + 0.6456 64.56%
CYP2C9 substrate - 0.8060 80.60%
CYP2D6 substrate - 0.8268 82.68%
CYP3A4 inhibition - 0.9674 96.74%
CYP2C9 inhibition - 0.9451 94.51%
CYP2C19 inhibition - 0.8795 87.95%
CYP2D6 inhibition - 0.8992 89.92%
CYP1A2 inhibition - 0.9079 90.79%
CYP2C8 inhibition + 0.7148 71.48%
CYP inhibitory promiscuity - 0.8848 88.48%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6278 62.78%
Eye corrosion - 0.9930 99.30%
Eye irritation - 0.8879 88.79%
Skin irritation - 0.8130 81.30%
Skin corrosion - 0.9616 96.16%
Ames mutagenesis - 0.5454 54.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7355 73.55%
Micronuclear + 0.6259 62.59%
Hepatotoxicity - 0.7177 71.77%
skin sensitisation - 0.9039 90.39%
Respiratory toxicity + 0.6333 63.33%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity - 0.9557 95.57%
Acute Oral Toxicity (c) III 0.4867 48.67%
Estrogen receptor binding + 0.8010 80.10%
Androgen receptor binding + 0.6135 61.35%
Thyroid receptor binding + 0.6473 64.73%
Glucocorticoid receptor binding - 0.4647 46.47%
Aromatase binding + 0.7327 73.27%
PPAR gamma + 0.8032 80.32%
Honey bee toxicity - 0.7296 72.96%
Biodegradation - 0.6000 60.00%
Crustacea aquatic toxicity - 0.6000 60.00%
Fish aquatic toxicity + 0.6534 65.34%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.81% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 97.52% 91.49%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 94.18% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.09% 89.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.28% 96.09%
CHEMBL241 Q14432 Phosphodiesterase 3A 93.08% 92.94%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 92.80% 83.57%
CHEMBL1937 Q92769 Histone deacetylase 2 92.66% 94.75%
CHEMBL3714130 P46095 G-protein coupled receptor 6 89.70% 97.36%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.52% 97.09%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 88.61% 99.15%
CHEMBL226 P30542 Adenosine A1 receptor 86.95% 95.93%
CHEMBL3194 P02766 Transthyretin 85.71% 90.71%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 85.67% 95.83%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.16% 99.17%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 84.04% 95.78%
CHEMBL2581 P07339 Cathepsin D 83.97% 98.95%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 83.44% 92.62%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.00% 95.89%
CHEMBL4208 P20618 Proteasome component C5 82.62% 90.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.06% 86.33%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 81.92% 89.62%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 81.71% 95.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ribes uva-crispa

Cross-Links

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PubChem 74977035
LOTUS LTS0120239
wikiData Q105266228