(2R)-5-(hydroxymethyl)-2-[(1S)-1-hydroxy-1-[(8S,9R,10R,13S,14S,17S)-8,14,17-trihydroxy-10,13-dimethyl-1-oxo-3,4,7,9,11,12,15,16-octahydro-2H-cyclopenta[a]phenanthren-17-yl]ethyl]-4-methyl-2,3-dihydropyran-6-one

Details

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Internal ID 4ad668e2-59c4-4b7c-a9c8-f961ea2b97d0
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Withanolides and derivatives
IUPAC Name (2R)-5-(hydroxymethyl)-2-[(1S)-1-hydroxy-1-[(8S,9R,10R,13S,14S,17S)-8,14,17-trihydroxy-10,13-dimethyl-1-oxo-3,4,7,9,11,12,15,16-octahydro-2H-cyclopenta[a]phenanthren-17-yl]ethyl]-4-methyl-2,3-dihydropyran-6-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C28H40O8/c1-16-14-21(36-22(31)18(16)15-29)25(4,32)27(34)12-13-28(35)23(27,2)10-9-19-24(3)17(6-5-7-20(24)30)8-11-26(19,28)33/h8,19,21,29,32-35H,5-7,9-15H2,1-4H3/t19-,21-,23-,24+,25+,26+,27+,28+/m1/s1
InChI Key YCPGHMDEIQEZJV-WQDTVZEUSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C28H40O8
Molecular Weight 504.60 g/mol
Exact Mass 504.27231823 g/mol
Topological Polar Surface Area (TPSA) 145.00 Ų
XlogP 0.30
Atomic LogP (AlogP) 1.85
H-Bond Acceptor 8
H-Bond Donor 5
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R)-5-(hydroxymethyl)-2-[(1S)-1-hydroxy-1-[(8S,9R,10R,13S,14S,17S)-8,14,17-trihydroxy-10,13-dimethyl-1-oxo-3,4,7,9,11,12,15,16-octahydro-2H-cyclopenta[a]phenanthren-17-yl]ethyl]-4-methyl-2,3-dihydropyran-6-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8651 86.51%
Caco-2 - 0.6678 66.78%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability + 0.5286 52.86%
Subcellular localzation Mitochondria 0.8215 82.15%
OATP2B1 inhibitior - 0.8595 85.95%
OATP1B1 inhibitior + 0.8643 86.43%
OATP1B3 inhibitior + 0.8868 88.68%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.5438 54.38%
BSEP inhibitior + 0.7632 76.32%
P-glycoprotein inhibitior - 0.4890 48.90%
P-glycoprotein substrate + 0.5243 52.43%
CYP3A4 substrate + 0.7037 70.37%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.9103 91.03%
CYP3A4 inhibition - 0.7935 79.35%
CYP2C9 inhibition - 0.9249 92.49%
CYP2C19 inhibition - 0.9334 93.34%
CYP2D6 inhibition - 0.9552 95.52%
CYP1A2 inhibition - 0.8935 89.35%
CYP2C8 inhibition + 0.5159 51.59%
CYP inhibitory promiscuity - 0.9669 96.69%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6405 64.05%
Eye corrosion - 0.9916 99.16%
Eye irritation - 0.9241 92.41%
Skin irritation + 0.6554 65.54%
Skin corrosion - 0.9384 93.84%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3690 36.90%
Micronuclear - 0.8100 81.00%
Hepatotoxicity + 0.6303 63.03%
skin sensitisation - 0.9323 93.23%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.8375 83.75%
Nephrotoxicity + 0.5773 57.73%
Acute Oral Toxicity (c) III 0.6536 65.36%
Estrogen receptor binding + 0.7996 79.96%
Androgen receptor binding + 0.7205 72.05%
Thyroid receptor binding + 0.6225 62.25%
Glucocorticoid receptor binding + 0.7283 72.83%
Aromatase binding + 0.7994 79.94%
PPAR gamma + 0.5995 59.95%
Honey bee toxicity - 0.8628 86.28%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.5800 58.00%
Fish aquatic toxicity + 0.9614 96.14%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 99.31% 97.25%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 94.43% 93.04%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.08% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.09% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 90.97% 94.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.95% 99.23%
CHEMBL2581 P07339 Cathepsin D 90.17% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.53% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.59% 86.33%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 87.58% 93.03%
CHEMBL3192 Q9BY41 Histone deacetylase 8 87.01% 93.99%
CHEMBL2996 Q05655 Protein kinase C delta 85.94% 97.79%
CHEMBL5103 Q969S8 Histone deacetylase 10 85.02% 90.08%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.47% 100.00%
CHEMBL1937 Q92769 Histone deacetylase 2 84.40% 94.75%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 84.24% 82.69%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.05% 95.89%
CHEMBL241 Q14432 Phosphodiesterase 3A 81.99% 92.94%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.48% 92.62%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.09% 89.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 81.04% 96.09%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ajuga parviflora

Cross-Links

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PubChem 162915573
LOTUS LTS0203001
wikiData Q104667788