[6-[3,5-Dihydroxy-2-(hydroxymethyl)-6-[[6-hydroxy-7,9,13-trimethyl-6-[3-methyl-4-(3,4,5-trihydroxy-6-methyloxan-2-yl)oxybutyl]-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-en-16-yl]oxy]oxan-4-yl]oxy-3,5-dihydroxy-4-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]methyl acetate

Details

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Internal ID 291c37ef-a587-4a2c-a000-147dd6849f70
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name [6-[3,5-dihydroxy-2-(hydroxymethyl)-6-[[6-hydroxy-7,9,13-trimethyl-6-[3-methyl-4-(3,4,5-trihydroxy-6-methyloxan-2-yl)oxybutyl]-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-en-16-yl]oxy]oxan-4-yl]oxy-3,5-dihydroxy-4-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]methyl acetate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C53H86O24/c1-21(19-69-47-41(63)39(61)35(57)23(3)70-47)9-14-53(67)22(2)34-30(77-53)16-29-27-8-7-25-15-26(10-12-51(25,5)28(27)11-13-52(29,34)6)71-49-43(65)45(37(59)32(18-55)73-49)76-50-44(66)46(38(60)33(74-50)20-68-24(4)56)75-48-42(64)40(62)36(58)31(17-54)72-48/h7,21-23,26-50,54-55,57-67H,8-20H2,1-6H3
InChI Key DTQGSXNBQHVJOM-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C53H86O24
Molecular Weight 1107.20 g/mol
Exact Mass 1106.55090361 g/mol
Topological Polar Surface Area (TPSA) 372.00 Ų
XlogP -1.20
Atomic LogP (AlogP) -2.44
H-Bond Acceptor 24
H-Bond Donor 13
Rotatable Bonds 16

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [6-[3,5-Dihydroxy-2-(hydroxymethyl)-6-[[6-hydroxy-7,9,13-trimethyl-6-[3-methyl-4-(3,4,5-trihydroxy-6-methyloxan-2-yl)oxybutyl]-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-en-16-yl]oxy]oxan-4-yl]oxy-3,5-dihydroxy-4-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]methyl acetate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8294 82.94%
Caco-2 - 0.8775 87.75%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.8220 82.20%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8620 86.20%
OATP1B3 inhibitior + 0.8670 86.70%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.6500 65.00%
BSEP inhibitior + 0.9346 93.46%
P-glycoprotein inhibitior + 0.7444 74.44%
P-glycoprotein substrate + 0.7013 70.13%
CYP3A4 substrate + 0.7557 75.57%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8779 87.79%
CYP3A4 inhibition - 0.9196 91.96%
CYP2C9 inhibition - 0.9244 92.44%
CYP2C19 inhibition - 0.9343 93.43%
CYP2D6 inhibition - 0.9378 93.78%
CYP1A2 inhibition - 0.9172 91.72%
CYP2C8 inhibition + 0.7448 74.48%
CYP inhibitory promiscuity - 0.9444 94.44%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5179 51.79%
Eye corrosion - 0.9902 99.02%
Eye irritation - 0.9024 90.24%
Skin irritation + 0.5497 54.97%
Skin corrosion - 0.9408 94.08%
Ames mutagenesis - 0.8600 86.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8073 80.73%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.8500 85.00%
skin sensitisation - 0.9231 92.31%
Respiratory toxicity + 0.7444 74.44%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity - 0.8394 83.94%
Acute Oral Toxicity (c) I 0.4770 47.70%
Estrogen receptor binding + 0.8475 84.75%
Androgen receptor binding + 0.7014 70.14%
Thyroid receptor binding + 0.5700 57.00%
Glucocorticoid receptor binding + 0.7534 75.34%
Aromatase binding + 0.6465 64.65%
PPAR gamma + 0.8134 81.34%
Honey bee toxicity - 0.6188 61.88%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.5855 58.55%
Fish aquatic toxicity + 0.9416 94.16%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.29% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.85% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 96.99% 95.93%
CHEMBL253 P34972 Cannabinoid CB2 receptor 96.51% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.05% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.57% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 93.36% 100.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 93.31% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.61% 97.09%
CHEMBL3359 P21462 Formyl peptide receptor 1 92.27% 93.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.28% 86.33%
CHEMBL218 P21554 Cannabinoid CB1 receptor 91.05% 96.61%
CHEMBL2581 P07339 Cathepsin D 90.49% 98.95%
CHEMBL5255 O00206 Toll-like receptor 4 89.23% 92.50%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 87.74% 89.05%
CHEMBL4227 P25090 Lipoxin A4 receptor 86.57% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.41% 95.89%
CHEMBL2360 P00492 Hypoxanthine-guanine phosphoribosyltransferase 84.31% 87.38%
CHEMBL5028 O14672 ADAM10 84.17% 97.50%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 83.86% 93.04%
CHEMBL1914 P06276 Butyrylcholinesterase 83.36% 95.00%
CHEMBL3401 O75469 Pregnane X receptor 83.33% 94.73%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 83.30% 96.90%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 82.69% 92.86%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.21% 100.00%
CHEMBL340 P08684 Cytochrome P450 3A4 82.08% 91.19%
CHEMBL1937 Q92769 Histone deacetylase 2 81.59% 94.75%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.38% 99.17%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 81.25% 94.08%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 80.91% 92.78%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 80.76% 94.62%
CHEMBL2413 P32246 C-C chemokine receptor type 1 80.30% 89.50%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 80.03% 98.46%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Helleborus viridis

Cross-Links

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PubChem 162932731
LOTUS LTS0182693
wikiData Q104988976