5-(Hydroxymethyl)-4-methyl-2-[1-[3,6,14-trihydroxy-2,16-dimethyl-5-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-8-oxapentacyclo[9.7.0.02,7.07,9.012,16]octadecan-15-yl]ethyl]-2,3-dihydropyran-6-one

Details

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Internal ID 8a5219c1-2c73-47ad-aef3-06a62eb59f1c
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Withanolides and derivatives > Withanolide glycosides and derivatives
IUPAC Name 5-(hydroxymethyl)-4-methyl-2-[1-[3,6,14-trihydroxy-2,16-dimethyl-5-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-8-oxapentacyclo[9.7.0.02,7.07,9.012,16]octadecan-15-yl]ethyl]-2,3-dihydropyran-6-one
SMILES (Canonical) CC1=C(C(=O)OC(C1)C(C)C2C(CC3C2(CCC4C3CC5C6(C4(C(CC(C6O)OC7C(C(C(C(O7)CO)O)O)O)O)C)O5)C)O)CO
SMILES (Isomeric) CC1=C(C(=O)OC(C1)C(C)C2C(CC3C2(CCC4C3CC5C6(C4(C(CC(C6O)OC7C(C(C(C(O7)CO)O)O)O)O)C)O5)C)O)CO
InChI InChI=1S/C34H52O13/c1-13-7-20(44-30(43)16(13)11-35)14(2)25-19(37)9-18-15-8-24-34(47-24)29(42)21(45-31-28(41)27(40)26(39)22(12-36)46-31)10-23(38)33(34,4)17(15)5-6-32(18,25)3/h14-15,17-29,31,35-42H,5-12H2,1-4H3
InChI Key HSRAUHLTIDICJW-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C34H52O13
Molecular Weight 668.80 g/mol
Exact Mass 668.34079171 g/mol
Topological Polar Surface Area (TPSA) 219.00 Ų
XlogP 0.20
Atomic LogP (AlogP) -0.87
H-Bond Acceptor 13
H-Bond Donor 8
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 5-(Hydroxymethyl)-4-methyl-2-[1-[3,6,14-trihydroxy-2,16-dimethyl-5-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-8-oxapentacyclo[9.7.0.02,7.07,9.012,16]octadecan-15-yl]ethyl]-2,3-dihydropyran-6-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7320 73.20%
Caco-2 - 0.8838 88.38%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.7021 70.21%
OATP2B1 inhibitior - 0.7236 72.36%
OATP1B1 inhibitior + 0.8451 84.51%
OATP1B3 inhibitior + 0.9040 90.40%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6526 65.26%
BSEP inhibitior - 0.6866 68.66%
P-glycoprotein inhibitior + 0.6719 67.19%
P-glycoprotein substrate + 0.5815 58.15%
CYP3A4 substrate + 0.7359 73.59%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8772 87.72%
CYP3A4 inhibition - 0.9371 93.71%
CYP2C9 inhibition - 0.8045 80.45%
CYP2C19 inhibition - 0.8673 86.73%
CYP2D6 inhibition - 0.9354 93.54%
CYP1A2 inhibition - 0.8724 87.24%
CYP2C8 inhibition + 0.6239 62.39%
CYP inhibitory promiscuity - 0.9564 95.64%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6854 68.54%
Eye corrosion - 0.9891 98.91%
Eye irritation - 0.9233 92.33%
Skin irritation - 0.5734 57.34%
Skin corrosion - 0.9381 93.81%
Ames mutagenesis - 0.6302 63.02%
Human Ether-a-go-go-Related Gene inhibition + 0.6481 64.81%
Micronuclear - 0.7300 73.00%
Hepatotoxicity - 0.6033 60.33%
skin sensitisation - 0.8903 89.03%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity + 0.5215 52.15%
Acute Oral Toxicity (c) I 0.7023 70.23%
Estrogen receptor binding + 0.6990 69.90%
Androgen receptor binding + 0.7282 72.82%
Thyroid receptor binding - 0.6418 64.18%
Glucocorticoid receptor binding + 0.5517 55.17%
Aromatase binding + 0.6842 68.42%
PPAR gamma + 0.6452 64.52%
Honey bee toxicity - 0.6277 62.77%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5700 57.00%
Fish aquatic toxicity + 0.9309 93.09%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL220 P22303 Acetylcholinesterase 96.62% 94.45%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 96.48% 85.14%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.65% 97.09%
CHEMBL4072 P07858 Cathepsin B 95.21% 93.67%
CHEMBL1937 Q92769 Histone deacetylase 2 94.99% 94.75%
CHEMBL5103 Q969S8 Histone deacetylase 10 92.22% 90.08%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.82% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.61% 91.11%
CHEMBL2581 P07339 Cathepsin D 91.54% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.47% 95.56%
CHEMBL2996 Q05655 Protein kinase C delta 91.26% 97.79%
CHEMBL3837 P07711 Cathepsin L 90.38% 96.61%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.24% 99.23%
CHEMBL3401 O75469 Pregnane X receptor 87.91% 94.73%
CHEMBL221 P23219 Cyclooxygenase-1 83.20% 90.17%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.07% 100.00%
CHEMBL228 P31645 Serotonin transporter 82.26% 95.51%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 81.59% 96.21%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 81.52% 95.83%
CHEMBL5028 O14672 ADAM10 81.42% 97.50%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.30% 94.00%
CHEMBL3359 P21462 Formyl peptide receptor 1 81.15% 93.56%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.07% 95.89%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.74% 95.89%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 80.38% 93.04%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Withania somnifera

Cross-Links

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PubChem 73025149
LOTUS LTS0112035
wikiData Q105033211