Cyanidin(1-)

Details

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Internal ID a78ccb66-1620-4e86-952e-62300e73b5c5
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Hydroxyflavonoids > 5-hydroxyflavonoids
IUPAC Name 4-(3,5-dihydroxy-7-oxochromen-2-yl)-2-hydroxyphenolate
SMILES (Canonical) C1=CC(=C(C=C1C2=C(C=C3C(=CC(=O)C=C3O2)O)O)O)[O-]
SMILES (Isomeric) C1=CC(=C(C=C1C2=C(C=C3C(=CC(=O)C=C3O2)O)O)O)[O-]
InChI InChI=1S/C15H10O6/c16-8-4-11(18)9-6-13(20)15(21-14(9)5-8)7-1-2-10(17)12(19)3-7/h1-6,17-20H/p-1
InChI Key NIPNPECHKPMAOO-UHFFFAOYSA-M
Popularity 5 references in papers

Physical and Chemical Properties

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Molecular Formula C15H9O6-
Molecular Weight 285.23 g/mol
Exact Mass 285.03991300 g/mol
Topological Polar Surface Area (TPSA) 110.00 Ų
XlogP 1.30
Atomic LogP (AlogP) 1.60
H-Bond Acceptor 6
H-Bond Donor 3
Rotatable Bonds 1

Synonyms

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CHEBI:71682
Q27139806
2-(3,4-dihydroxyphenyl)-7-hydroxychromenium-3,5-diolate
4-(3,5-dihydroxy-7-oxochromen-2-yl)-2-hydroxyphenolate

2D Structure

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2D Structure of Cyanidin(1-)

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9343 93.43%
Caco-2 - 0.6439 64.39%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability + 0.6143 61.43%
Subcellular localzation Mitochondria 0.7370 73.70%
OATP2B1 inhibitior - 0.5101 51.01%
OATP1B1 inhibitior + 0.9072 90.72%
OATP1B3 inhibitior + 0.9106 91.06%
MATE1 inhibitior - 0.5400 54.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.6463 64.63%
P-glycoprotein inhibitior - 0.9267 92.67%
P-glycoprotein substrate - 0.9317 93.17%
CYP3A4 substrate - 0.5327 53.27%
CYP2C9 substrate - 0.6091 60.91%
CYP2D6 substrate - 0.8633 86.33%
CYP3A4 inhibition - 0.7429 74.29%
CYP2C9 inhibition + 0.9562 95.62%
CYP2C19 inhibition + 0.7166 71.66%
CYP2D6 inhibition - 0.9000 90.00%
CYP1A2 inhibition + 0.8751 87.51%
CYP2C8 inhibition + 0.5717 57.17%
CYP inhibitory promiscuity + 0.5641 56.41%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6108 61.08%
Eye corrosion - 0.9709 97.09%
Eye irritation + 0.9465 94.65%
Skin irritation + 0.6524 65.24%
Skin corrosion - 0.9584 95.84%
Ames mutagenesis - 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition - 0.8490 84.90%
Micronuclear + 0.9200 92.00%
Hepatotoxicity + 0.6750 67.50%
skin sensitisation - 0.7749 77.49%
Respiratory toxicity + 0.6111 61.11%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity - 0.6256 62.56%
Acute Oral Toxicity (c) II 0.5575 55.75%
Estrogen receptor binding + 0.8572 85.72%
Androgen receptor binding + 0.8687 86.87%
Thyroid receptor binding + 0.6375 63.75%
Glucocorticoid receptor binding + 0.9089 90.89%
Aromatase binding + 0.8877 88.77%
PPAR gamma + 0.8690 86.90%
Honey bee toxicity - 0.9006 90.06%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.6100 61.00%
Fish aquatic toxicity + 0.8306 83.06%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.45% 91.11%
CHEMBL2581 P07339 Cathepsin D 95.16% 98.95%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 90.82% 99.15%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.37% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.06% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.57% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 87.42% 94.00%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 86.72% 90.71%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 86.61% 93.40%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 86.14% 96.95%
CHEMBL2850 P49840 Glycogen synthase kinase-3 alpha 83.07% 88.84%
CHEMBL2208 P49137 MAP kinase-activated protein kinase 2 81.62% 95.20%
CHEMBL3976 Q9UHL4 Dipeptidyl peptidase II 81.12% 92.29%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.03% 99.17%
CHEMBL3194 P02766 Transthyretin 81.03% 90.71%
CHEMBL4040 P28482 MAP kinase ERK2 80.68% 83.82%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Prunella vulgaris

Cross-Links

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PubChem 25202542
NPASS NPC181143