Cyanidin 3-sophoroside 5-glucoside

Details

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Internal ID ac299052-205d-4ddf-b1f9-3210c1081241
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Anthocyanins > Anthocyanidin-5-O-glycosides
IUPAC Name (2S,3R,4S,5S,6R)-2-[(2R,3R,4S,5S,6R)-2-[2-(3,4-dihydroxyphenyl)-7-hydroxy-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromenylium-3-yl]oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) C1=CC(=C(C=C1C2=C(C=C3C(=CC(=CC3=[O+]2)O)OC4C(C(C(C(O4)CO)O)O)O)OC5C(C(C(C(O5)CO)O)O)OC6C(C(C(C(O6)CO)O)O)O)O)O
SMILES (Isomeric) C1=CC(=C(C=C1C2=C(C=C3C(=CC(=CC3=[O+]2)O)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)O[C@@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)O)O
InChI InChI=1S/C33H40O21/c34-7-18-21(40)24(43)27(46)31(51-18)49-16-5-11(37)4-15-12(16)6-17(29(48-15)10-1-2-13(38)14(39)3-10)50-33-30(26(45)23(42)20(9-36)53-33)54-32-28(47)25(44)22(41)19(8-35)52-32/h1-6,18-28,30-36,40-47H,7-9H2,(H2-,37,38,39)/p+1/t18-,19-,20-,21-,22-,23-,24+,25+,26+,27-,28-,30-,31-,32+,33+/m1/s1
InChI Key LOXRHOFBKUTJEZ-QSJHZMFDSA-O
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C33H41O21+
Molecular Weight 773.70 g/mol
Exact Mass 773.21403331 g/mol
Topological Polar Surface Area (TPSA) 340.00 Ų
XlogP 0.00
Atomic LogP (AlogP) -4.32
H-Bond Acceptor 20
H-Bond Donor 14
Rotatable Bonds 10

Synonyms

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CHEBI:178035
Cyanidin 3-sophoroside 5-glucoside
Cyanidin 5-glucoside 3-sophoroside
Cyanidin-3-sophoroside-5-glucoside
Cyanidin 3-O-sophoroside-5-O-glucoside
(2S,3R,5S)-2-[(2S,5S)-2-[2-(3,4-dihydroxyphenyl)-7-hydroxy-5-[(2S,4S,5S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromenylium-3-yl]oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

2D Structure

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2D Structure of Cyanidin 3-sophoroside 5-glucoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8494 84.94%
Caco-2 - 0.9106 91.06%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Nucleus 0.4431 44.31%
OATP2B1 inhibitior - 0.5733 57.33%
OATP1B1 inhibitior + 0.9296 92.96%
OATP1B3 inhibitior + 0.9511 95.11%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.4717 47.17%
P-glycoprotein inhibitior - 0.4571 45.71%
P-glycoprotein substrate - 0.7683 76.83%
CYP3A4 substrate + 0.6196 61.96%
CYP2C9 substrate - 0.8060 80.60%
CYP2D6 substrate - 0.8268 82.68%
CYP3A4 inhibition - 0.9662 96.62%
CYP2C9 inhibition - 0.9043 90.43%
CYP2C19 inhibition - 0.8149 81.49%
CYP2D6 inhibition - 0.9110 91.10%
CYP1A2 inhibition - 0.8934 89.34%
CYP2C8 inhibition + 0.8096 80.96%
CYP inhibitory promiscuity - 0.7658 76.58%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6229 62.29%
Eye corrosion - 0.9921 99.21%
Eye irritation - 0.8966 89.66%
Skin irritation - 0.8185 81.85%
Skin corrosion - 0.9635 96.35%
Ames mutagenesis - 0.5137 51.37%
Human Ether-a-go-go-Related Gene inhibition + 0.7559 75.59%
Micronuclear + 0.6259 62.59%
Hepatotoxicity - 0.8821 88.21%
skin sensitisation - 0.9093 90.93%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.6111 61.11%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.7571 75.71%
Acute Oral Toxicity (c) IV 0.4162 41.62%
Estrogen receptor binding + 0.7847 78.47%
Androgen receptor binding + 0.6275 62.75%
Thyroid receptor binding + 0.5212 52.12%
Glucocorticoid receptor binding - 0.6793 67.93%
Aromatase binding + 0.6042 60.42%
PPAR gamma + 0.7254 72.54%
Honey bee toxicity - 0.6767 67.67%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.7348 73.48%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.36% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 98.00% 91.49%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 93.93% 99.15%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.36% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 90.42% 94.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.94% 96.09%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 88.20% 95.78%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.39% 99.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.05% 86.33%
CHEMBL2581 P07339 Cathepsin D 86.29% 98.95%
CHEMBL3194 P02766 Transthyretin 85.25% 90.71%
CHEMBL241 Q14432 Phosphodiesterase 3A 85.08% 92.94%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 82.89% 86.92%
CHEMBL3401 O75469 Pregnane X receptor 82.88% 94.73%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 82.00% 83.00%
CHEMBL213 P08588 Beta-1 adrenergic receptor 81.69% 95.56%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.61% 95.89%
CHEMBL3714130 P46095 G-protein coupled receptor 6 81.18% 97.36%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ajuga reptans
Brassica oleracea
Ipomoea batatas

Cross-Links

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PubChem 131752380
LOTUS LTS0147834
wikiData Q104252821