Cyanidin 3-(6''-succinyl-glucoside)

Details

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Internal ID 838ea682-c95a-42b7-848c-148de7d4ab01
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Anthocyanins > Anthocyanidin-3-O-glycosides
IUPAC Name 4-[[(2R,3S,4S,5R,6S)-6-[2-(3,4-dihydroxyphenyl)-5,7-dihydroxychromenylium-3-yl]oxy-3,4,5-trihydroxyoxan-2-yl]methoxy]-4-oxobutanoic acid
SMILES (Canonical) C1=CC(=C(C=C1C2=[O+]C3=CC(=CC(=C3C=C2OC4C(C(C(C(O4)COC(=O)CCC(=O)O)O)O)O)O)O)O)O
SMILES (Isomeric) C1=CC(=C(C=C1C2=[O+]C3=CC(=CC(=C3C=C2O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)COC(=O)CCC(=O)O)O)O)O)O)O)O)O
InChI InChI=1S/C25H24O14/c26-11-6-14(28)12-8-17(24(37-16(12)7-11)10-1-2-13(27)15(29)5-10)38-25-23(35)22(34)21(33)18(39-25)9-36-20(32)4-3-19(30)31/h1-2,5-8,18,21-23,25,33-35H,3-4,9H2,(H4-,26,27,28,29,30,31)/p+1/t18-,21-,22+,23-,25-/m1/s1
InChI Key MIYGQTFETYBMKF-WVXUANQFSA-O
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C25H25O14+
Molecular Weight 549.50 g/mol
Exact Mass 549.12443047 g/mol
Topological Polar Surface Area (TPSA) 225.00 Ų
XlogP 0.00
Atomic LogP (AlogP) 0.80
H-Bond Acceptor 12
H-Bond Donor 8
Rotatable Bonds 8

Synonyms

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DTXSID401341796
Cyanidin 3-(6''-succinyl-glucoside)
Cyanidin 3-(6-O-succinoyl-beta-D-glucopyranoside)
3',4',5,7-Tetrahydroxy-3-[[6-O-(4-hydroxy-1,4-dioxobutyl)-beta-D-glucopyranosyl]oxy]flavylium

2D Structure

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2D Structure of Cyanidin 3-(6''-succinyl-glucoside)

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7741 77.41%
Caco-2 - 0.9063 90.63%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.6613 66.13%
OATP2B1 inhibitior - 0.5579 55.79%
OATP1B1 inhibitior + 0.8937 89.37%
OATP1B3 inhibitior + 0.9173 91.73%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.7787 77.87%
BSEP inhibitior + 0.5914 59.14%
P-glycoprotein inhibitior - 0.4437 44.37%
P-glycoprotein substrate - 0.7538 75.38%
CYP3A4 substrate + 0.6309 63.09%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8540 85.40%
CYP3A4 inhibition - 0.8973 89.73%
CYP2C9 inhibition - 0.8861 88.61%
CYP2C19 inhibition - 0.7816 78.16%
CYP2D6 inhibition - 0.8978 89.78%
CYP1A2 inhibition - 0.7427 74.27%
CYP2C8 inhibition + 0.8130 81.30%
CYP inhibitory promiscuity - 0.9596 95.96%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.7102 71.02%
Eye corrosion - 0.9907 99.07%
Eye irritation - 0.8896 88.96%
Skin irritation - 0.8281 82.81%
Skin corrosion - 0.9585 95.85%
Ames mutagenesis - 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3850 38.50%
Micronuclear - 0.5841 58.41%
Hepatotoxicity - 0.8125 81.25%
skin sensitisation - 0.9044 90.44%
Respiratory toxicity + 0.6333 63.33%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.6875 68.75%
Nephrotoxicity - 0.9176 91.76%
Acute Oral Toxicity (c) III 0.5178 51.78%
Estrogen receptor binding + 0.8155 81.55%
Androgen receptor binding + 0.6292 62.92%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding + 0.5879 58.79%
Aromatase binding + 0.6700 67.00%
PPAR gamma + 0.6793 67.93%
Honey bee toxicity - 0.7763 77.63%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.6704 67.04%
Fish aquatic toxicity + 0.9546 95.46%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.06% 91.11%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 96.78% 99.15%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.93% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 94.54% 99.17%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.90% 89.00%
CHEMBL1951 P21397 Monoamine oxidase A 92.07% 91.49%
CHEMBL2581 P07339 Cathepsin D 91.29% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.09% 86.33%
CHEMBL4040 P28482 MAP kinase ERK2 87.01% 83.82%
CHEMBL3194 P02766 Transthyretin 86.78% 90.71%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.76% 94.45%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 84.59% 86.92%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.32% 94.00%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 83.28% 95.78%
CHEMBL213 P08588 Beta-1 adrenergic receptor 82.37% 95.56%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.31% 96.00%
CHEMBL340 P08684 Cytochrome P450 3A4 82.20% 91.19%
CHEMBL5255 O00206 Toll-like receptor 4 81.47% 92.50%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.10% 95.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Phragmites australis

Cross-Links

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PubChem 100917934
NPASS NPC149803
LOTUS LTS0236141
wikiData Q105165279