Corymbiferin 3-O-beta-D-glucopyranoside

Details

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Internal ID 6d0b5fb7-322e-4e25-a3d5-5dfb817ee303
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 1,8-dihydroxy-4,5-dimethoxy-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyxanthen-9-one
SMILES (Canonical) COC1=C2C(=C(C=C1)O)C(=O)C3=C(O2)C(=C(C=C3O)OC4C(C(C(C(O4)CO)O)O)O)OC
SMILES (Isomeric) COC1=C2C(=C(C=C1)O)C(=O)C3=C(O2)C(=C(C=C3O)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)OC
InChI InChI=1S/C21H22O12/c1-29-9-4-3-7(23)12-15(26)13-8(24)5-10(19(30-2)20(13)33-18(9)12)31-21-17(28)16(27)14(25)11(6-22)32-21/h3-5,11,14,16-17,21-25,27-28H,6H2,1-2H3/t11-,14-,16+,17-,21-/m1/s1
InChI Key YYBFILICFFBVIZ-AAHOILBJSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C21H22O12
Molecular Weight 466.40 g/mol
Exact Mass 466.11112613 g/mol
Topological Polar Surface Area (TPSA) 185.00 Ų
XlogP 0.60
Atomic LogP (AlogP) -0.45
H-Bond Acceptor 12
H-Bond Donor 6
Rotatable Bonds 5

Synonyms

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CHEMBL466340
1,8-dihydroxy-4,5-dimethoxy-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyxanthen-9-one

2D Structure

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2D Structure of Corymbiferin 3-O-beta-D-glucopyranoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5891 58.91%
Caco-2 - 0.8034 80.34%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.5382 53.82%
OATP2B1 inhibitior - 0.5568 55.68%
OATP1B1 inhibitior + 0.9127 91.27%
OATP1B3 inhibitior + 0.9702 97.02%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.4861 48.61%
P-glycoprotein inhibitior - 0.6673 66.73%
P-glycoprotein substrate - 0.7559 75.59%
CYP3A4 substrate + 0.5632 56.32%
CYP2C9 substrate - 0.8485 84.85%
CYP2D6 substrate - 0.8501 85.01%
CYP3A4 inhibition - 0.8887 88.87%
CYP2C9 inhibition - 0.9431 94.31%
CYP2C19 inhibition - 0.9262 92.62%
CYP2D6 inhibition - 0.9179 91.79%
CYP1A2 inhibition - 0.8804 88.04%
CYP2C8 inhibition + 0.4819 48.19%
CYP inhibitory promiscuity - 0.8059 80.59%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7283 72.83%
Eye corrosion - 0.9891 98.91%
Eye irritation - 0.8876 88.76%
Skin irritation - 0.8272 82.72%
Skin corrosion - 0.9636 96.36%
Ames mutagenesis + 0.7436 74.36%
Human Ether-a-go-go-Related Gene inhibition - 0.4744 47.44%
Micronuclear + 0.6133 61.33%
Hepatotoxicity - 0.6250 62.50%
skin sensitisation - 0.9214 92.14%
Respiratory toxicity + 0.5556 55.56%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity - 0.6000 60.00%
Nephrotoxicity - 0.6485 64.85%
Acute Oral Toxicity (c) III 0.7037 70.37%
Estrogen receptor binding + 0.8327 83.27%
Androgen receptor binding + 0.5765 57.65%
Thyroid receptor binding + 0.5841 58.41%
Glucocorticoid receptor binding + 0.7791 77.91%
Aromatase binding + 0.5954 59.54%
PPAR gamma + 0.6333 63.33%
Honey bee toxicity - 0.8354 83.54%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6949 69.49%
Fish aquatic toxicity + 0.6994 69.94%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.68% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 93.14% 94.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.90% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.68% 89.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.54% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.21% 99.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.80% 86.33%
CHEMBL2581 P07339 Cathepsin D 87.60% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.15% 94.45%
CHEMBL3194 P02766 Transthyretin 85.16% 90.71%
CHEMBL3401 O75469 Pregnane X receptor 83.56% 94.73%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 82.85% 86.92%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 82.56% 99.15%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 81.91% 96.21%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.37% 96.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gentianella amarella

Cross-Links

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PubChem 24878797
LOTUS LTS0047599
wikiData Q105368367