Carbendazim

Details

Top
Internal ID c6428837-3c0d-4530-8fbf-15b3d5512dd9
Taxonomy Organoheterocyclic compounds > Benzimidazoles > 2-benzimidazolylcarbamic acid esters
IUPAC Name methyl N-(1H-benzimidazol-2-yl)carbamate
SMILES (Canonical) COC(=O)NC1=NC2=CC=CC=C2N1
SMILES (Isomeric) COC(=O)NC1=NC2=CC=CC=C2N1
InChI InChI=1S/C9H9N3O2/c1-14-9(13)12-8-10-6-4-2-3-5-7(6)11-8/h2-5H,1H3,(H2,10,11,12,13)
InChI Key TWFZGCMQGLPBSX-UHFFFAOYSA-N
Popularity 4,825 references in papers

Physical and Chemical Properties

Top
Molecular Formula C9H9N3O2
Molecular Weight 191.19 g/mol
Exact Mass 191.069476538 g/mol
Topological Polar Surface Area (TPSA) 67.00 Ų
XlogP 1.50
Atomic LogP (AlogP) 1.74
H-Bond Acceptor 3
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

Top
10605-21-7
Carbendazole
Bavistin
Mecarzole
Thicoper
Carbendazime
Bavistan
Carbendazol
Derosal
Funaben
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

Top
2D Structure of Carbendazim

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9936 99.36%
Caco-2 + 0.9313 93.13%
Blood Brain Barrier + 0.6750 67.50%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.5978 59.78%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9668 96.68%
OATP1B3 inhibitior + 0.9508 95.08%
MATE1 inhibitior - 0.8000 80.00%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior - 0.8861 88.61%
P-glycoprotein inhibitior - 0.9617 96.17%
P-glycoprotein substrate - 0.9706 97.06%
CYP3A4 substrate - 0.5594 55.94%
CYP2C9 substrate - 0.8078 80.78%
CYP2D6 substrate - 0.7482 74.82%
CYP3A4 inhibition - 0.9012 90.12%
CYP2C9 inhibition - 0.9628 96.28%
CYP2C19 inhibition - 0.9444 94.44%
CYP2D6 inhibition - 0.8693 86.93%
CYP1A2 inhibition + 0.9220 92.20%
CYP2C8 inhibition + 0.4494 44.94%
CYP inhibitory promiscuity - 0.9225 92.25%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.5691 56.91%
Eye corrosion - 0.9869 98.69%
Eye irritation + 0.6721 67.21%
Skin irritation - 0.8721 87.21%
Skin corrosion - 0.9639 96.39%
Ames mutagenesis + 0.8100 81.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6559 65.59%
Micronuclear + 0.9800 98.00%
Hepatotoxicity + 0.9000 90.00%
skin sensitisation - 0.9316 93.16%
Respiratory toxicity - 0.6000 60.00%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity - 0.6625 66.25%
Nephrotoxicity + 0.7289 72.89%
Acute Oral Toxicity (c) IV 0.6133 61.33%
Estrogen receptor binding - 0.8171 81.71%
Androgen receptor binding - 0.6403 64.03%
Thyroid receptor binding + 0.6562 65.62%
Glucocorticoid receptor binding + 0.6538 65.38%
Aromatase binding + 0.8685 86.85%
PPAR gamma - 0.6889 68.89%
Honey bee toxicity - 0.9679 96.79%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity + 0.7600 76.00%
Fish aquatic toxicity + 0.6577 65.77%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.66% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.16% 85.14%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 89.67% 99.23%
CHEMBL2535 P11166 Glucose transporter 84.99% 98.75%
CHEMBL2581 P07339 Cathepsin D 84.08% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.98% 95.56%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.63% 94.00%
CHEMBL3401 O75469 Pregnane X receptor 81.84% 94.73%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 81.80% 91.11%
CHEMBL5028 O14672 ADAM10 81.53% 97.50%
CHEMBL255 P29275 Adenosine A2b receptor 81.42% 98.59%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.26% 99.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.64% 86.33%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Arabidopsis thaliana
Litsea cubeba
Musa acuminata

Cross-Links

Top
PubChem 25429
NPASS NPC42483
ChEMBL CHEMBL70971
LOTUS LTS0051184
wikiData Q418607