5,6-Dihydroxy-16-[1-[5-(hydroxymethyl)-4-methyl-6-oxo-2,3-dihydropyran-2-yl]ethyl]-2,17-dimethyl-8,13-dioxahexacyclo[9.8.0.02,7.07,9.012,14.012,17]nonadecan-3-one

Details

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Internal ID 5767786e-0e18-43d3-bf76-93c211e42d2f
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Withanolides and derivatives
IUPAC Name 5,6-dihydroxy-16-[1-[5-(hydroxymethyl)-4-methyl-6-oxo-2,3-dihydropyran-2-yl]ethyl]-2,17-dimethyl-8,13-dioxahexacyclo[9.8.0.02,7.07,9.012,14.012,17]nonadecan-3-one
SMILES (Canonical) CC1=C(C(=O)OC(C1)C(C)C2CC3C4(C2(CCC5C4CC6C7(C5(C(=O)CC(C7O)O)C)O6)C)O3)CO
SMILES (Isomeric) CC1=C(C(=O)OC(C1)C(C)C2CC3C4(C2(CCC5C4CC6C7(C5(C(=O)CC(C7O)O)C)O6)C)O3)CO
InChI InChI=1S/C28H38O8/c1-12-7-19(34-24(33)14(12)11-29)13(2)16-8-21-27(35-21)17-9-22-28(36-22)23(32)18(30)10-20(31)26(28,4)15(17)5-6-25(16,27)3/h13,15-19,21-23,29-30,32H,5-11H2,1-4H3
InChI Key DVMRXXYECRHVNS-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C28H38O8
Molecular Weight 502.60 g/mol
Exact Mass 502.25666817 g/mol
Topological Polar Surface Area (TPSA) 129.00 Ų
XlogP 1.30
Atomic LogP (AlogP) 1.68
H-Bond Acceptor 8
H-Bond Donor 3
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 5,6-Dihydroxy-16-[1-[5-(hydroxymethyl)-4-methyl-6-oxo-2,3-dihydropyran-2-yl]ethyl]-2,17-dimethyl-8,13-dioxahexacyclo[9.8.0.02,7.07,9.012,14.012,17]nonadecan-3-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8868 88.68%
Caco-2 - 0.7550 75.50%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability + 0.6286 62.86%
Subcellular localzation Mitochondria 0.7598 75.98%
OATP2B1 inhibitior - 0.5677 56.77%
OATP1B1 inhibitior + 0.8319 83.19%
OATP1B3 inhibitior + 0.9331 93.31%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6079 60.79%
BSEP inhibitior + 0.7690 76.90%
P-glycoprotein inhibitior - 0.4831 48.31%
P-glycoprotein substrate + 0.5898 58.98%
CYP3A4 substrate + 0.6910 69.10%
CYP2C9 substrate - 0.8259 82.59%
CYP2D6 substrate - 0.8882 88.82%
CYP3A4 inhibition - 0.6932 69.32%
CYP2C9 inhibition - 0.8180 81.80%
CYP2C19 inhibition - 0.9048 90.48%
CYP2D6 inhibition - 0.9511 95.11%
CYP1A2 inhibition - 0.8499 84.99%
CYP2C8 inhibition + 0.4498 44.98%
CYP inhibitory promiscuity - 0.9760 97.60%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5877 58.77%
Eye corrosion - 0.9902 99.02%
Eye irritation - 0.9483 94.83%
Skin irritation + 0.5549 55.49%
Skin corrosion - 0.9342 93.42%
Ames mutagenesis - 0.5624 56.24%
Human Ether-a-go-go-Related Gene inhibition + 0.6783 67.83%
Micronuclear - 0.7300 73.00%
Hepatotoxicity + 0.5949 59.49%
skin sensitisation - 0.8926 89.26%
Respiratory toxicity + 0.8222 82.22%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.7750 77.50%
Nephrotoxicity + 0.7162 71.62%
Acute Oral Toxicity (c) I 0.5720 57.20%
Estrogen receptor binding + 0.7401 74.01%
Androgen receptor binding + 0.7637 76.37%
Thyroid receptor binding + 0.5279 52.79%
Glucocorticoid receptor binding + 0.7490 74.90%
Aromatase binding + 0.7959 79.59%
PPAR gamma + 0.6454 64.54%
Honey bee toxicity - 0.8097 80.97%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6100 61.00%
Fish aquatic toxicity + 0.9630 96.30%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL1937 Q92769 Histone deacetylase 2 96.90% 94.75%
CHEMBL204 P00734 Thrombin 95.62% 96.01%
CHEMBL5103 Q969S8 Histone deacetylase 10 93.96% 90.08%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.78% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.48% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.12% 97.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 93.09% 85.14%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.52% 97.25%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 92.30% 82.69%
CHEMBL2996 Q05655 Protein kinase C delta 92.13% 97.79%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.01% 91.11%
CHEMBL2581 P07339 Cathepsin D 89.91% 98.95%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.62% 99.23%
CHEMBL3837 P07711 Cathepsin L 88.25% 96.61%
CHEMBL4072 P07858 Cathepsin B 88.20% 93.67%
CHEMBL3310 Q96DB2 Histone deacetylase 11 87.71% 88.56%
CHEMBL325 Q13547 Histone deacetylase 1 86.62% 95.92%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 86.41% 93.04%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 84.20% 93.03%
CHEMBL3359 P21462 Formyl peptide receptor 1 83.96% 93.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.27% 86.33%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.31% 100.00%
CHEMBL3192 Q9BY41 Histone deacetylase 8 81.25% 93.99%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 80.62% 90.71%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 80.05% 96.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Withania somnifera

Cross-Links

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PubChem 73190083
LOTUS LTS0226362
wikiData Q104888931