[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-2-(1,3,6,7-tetrahydroxy-9-oxoxanthen-2-yl)oxan-3-yl] benzoate

Details

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Internal ID f4be2ac2-0744-497d-b79c-157bc8cb6d28
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name [(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-2-(1,3,6,7-tetrahydroxy-9-oxoxanthen-2-yl)oxan-3-yl] benzoate
SMILES (Canonical) C1=CC=C(C=C1)C(=O)OC2C(C(C(OC2C3=C(C4=C(C=C3O)OC5=CC(=C(C=C5C4=O)O)O)O)CO)O)O
SMILES (Isomeric) C1=CC=C(C=C1)C(=O)O[C@@H]2[C@H]([C@@H]([C@H](O[C@H]2C3=C(C4=C(C=C3O)OC5=CC(=C(C=C5C4=O)O)O)O)CO)O)O
InChI InChI=1S/C26H22O12/c27-9-17-21(32)23(34)25(38-26(35)10-4-2-1-3-5-10)24(37-17)18-14(30)8-16-19(22(18)33)20(31)11-6-12(28)13(29)7-15(11)36-16/h1-8,17,21,23-25,27-30,32-34H,9H2/t17-,21-,23+,24+,25-/m1/s1
InChI Key AVPLATUJXHPZBU-FUFTYFEXSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C26H22O12
Molecular Weight 526.40 g/mol
Exact Mass 526.11112613 g/mol
Topological Polar Surface Area (TPSA) 203.00 Ų
XlogP 1.90
Atomic LogP (AlogP) 1.15
H-Bond Acceptor 12
H-Bond Donor 7
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-2-(1,3,6,7-tetrahydroxy-9-oxoxanthen-2-yl)oxan-3-yl] benzoate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6249 62.49%
Caco-2 - 0.9377 93.77%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Mitochondria 0.5589 55.89%
OATP2B1 inhibitior - 0.5372 53.72%
OATP1B1 inhibitior + 0.8133 81.33%
OATP1B3 inhibitior + 0.9680 96.80%
MATE1 inhibitior - 0.8000 80.00%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior + 0.7500 75.00%
P-glycoprotein inhibitior + 0.5826 58.26%
P-glycoprotein substrate - 0.7081 70.81%
CYP3A4 substrate + 0.6083 60.83%
CYP2C9 substrate - 0.6039 60.39%
CYP2D6 substrate - 0.8590 85.90%
CYP3A4 inhibition - 0.9184 91.84%
CYP2C9 inhibition - 0.9174 91.74%
CYP2C19 inhibition - 0.9299 92.99%
CYP2D6 inhibition - 0.9641 96.41%
CYP1A2 inhibition - 0.9320 93.20%
CYP2C8 inhibition + 0.6195 61.95%
CYP inhibitory promiscuity - 0.8782 87.82%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.7263 72.63%
Eye corrosion - 0.9928 99.28%
Eye irritation - 0.8559 85.59%
Skin irritation - 0.8274 82.74%
Skin corrosion - 0.9638 96.38%
Ames mutagenesis + 0.5200 52.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4051 40.51%
Micronuclear + 0.6633 66.33%
Hepatotoxicity - 0.6125 61.25%
skin sensitisation - 0.9201 92.01%
Respiratory toxicity + 0.7444 74.44%
Reproductive toxicity + 0.7667 76.67%
Mitochondrial toxicity + 0.6875 68.75%
Nephrotoxicity - 0.9547 95.47%
Acute Oral Toxicity (c) IV 0.4205 42.05%
Estrogen receptor binding + 0.7475 74.75%
Androgen receptor binding + 0.7392 73.92%
Thyroid receptor binding - 0.5257 52.57%
Glucocorticoid receptor binding + 0.5801 58.01%
Aromatase binding - 0.6480 64.80%
PPAR gamma + 0.6161 61.61%
Honey bee toxicity - 0.7527 75.27%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.6100 61.00%
Fish aquatic toxicity + 0.8695 86.95%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.99% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 97.26% 91.49%
CHEMBL2581 P07339 Cathepsin D 97.11% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.67% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.04% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.90% 95.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.86% 99.17%
CHEMBL2095172 P14867 GABA-A receptor; alpha-1/beta-2/gamma-2 88.83% 92.67%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.26% 99.23%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.83% 94.00%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 85.11% 83.00%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 83.26% 94.23%
CHEMBL3194 P02766 Transthyretin 82.59% 90.71%
CHEMBL3401 O75469 Pregnane X receptor 81.77% 94.73%
CHEMBL5678 P34947 G protein-coupled receptor kinase 5 81.09% 88.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Fridericia samydoides
Polygala caudata

Cross-Links

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PubChem 21589503
LOTUS LTS0235779
wikiData Q104919696