3-[(2S,5S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromene-4,5,7-triol

Details

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Internal ID e7748865-67f3-41fd-8d27-fef0305f0015
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides > Flavonoid-3-O-glycosides
IUPAC Name 3-[(2S,5S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromene-4,5,7-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C21H24O13/c22-5-12-15(28)17(30)18(31)21(33-12)34-20-16(29)13-8(24)3-7(23)4-11(13)32-19(20)6-1-9(25)14(27)10(26)2-6/h1-4,12,15-31H,5H2/t12?,15-,16?,17?,18?,19?,20?,21+/m1/s1
InChI Key XCZZWPJIGBONJX-LRJZKLSJSA-N
Popularity 41 references in papers

Physical and Chemical Properties

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Molecular Formula C21H24O13
Molecular Weight 484.40 g/mol
Exact Mass 484.12169082 g/mol
Topological Polar Surface Area (TPSA) 230.00 Ų
XlogP -1.60
Atomic LogP (AlogP) -1.43
H-Bond Acceptor 13
H-Bond Donor 10
Rotatable Bonds 4

Synonyms

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LMPK12020205

2D Structure

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2D Structure of 3-[(2S,5S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromene-4,5,7-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6152 61.52%
Caco-2 - 0.9165 91.65%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.8857 88.57%
Subcellular localzation Mitochondria 0.5593 55.93%
OATP2B1 inhibitior + 0.5818 58.18%
OATP1B1 inhibitior + 0.8664 86.64%
OATP1B3 inhibitior + 0.9458 94.58%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior - 0.5595 55.95%
P-glycoprotein inhibitior - 0.7182 71.82%
P-glycoprotein substrate - 0.9116 91.16%
CYP3A4 substrate + 0.5495 54.95%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7865 78.65%
CYP3A4 inhibition - 0.9380 93.80%
CYP2C9 inhibition - 0.8993 89.93%
CYP2C19 inhibition - 0.8542 85.42%
CYP2D6 inhibition - 0.9296 92.96%
CYP1A2 inhibition - 0.9044 90.44%
CYP2C8 inhibition + 0.5503 55.03%
CYP inhibitory promiscuity - 0.7226 72.26%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6626 66.26%
Eye corrosion - 0.9931 99.31%
Eye irritation - 0.7737 77.37%
Skin irritation - 0.8097 80.97%
Skin corrosion - 0.9676 96.76%
Ames mutagenesis + 0.5109 51.09%
Human Ether-a-go-go-Related Gene inhibition + 0.7317 73.17%
Micronuclear + 0.6259 62.59%
Hepatotoxicity - 0.7500 75.00%
skin sensitisation - 0.9111 91.11%
Respiratory toxicity + 0.5111 51.11%
Reproductive toxicity + 0.6333 63.33%
Mitochondrial toxicity - 0.5500 55.00%
Nephrotoxicity - 0.8352 83.52%
Acute Oral Toxicity (c) III 0.4231 42.31%
Estrogen receptor binding + 0.5792 57.92%
Androgen receptor binding + 0.6224 62.24%
Thyroid receptor binding + 0.6200 62.00%
Glucocorticoid receptor binding - 0.5236 52.36%
Aromatase binding + 0.6460 64.60%
PPAR gamma + 0.6694 66.94%
Honey bee toxicity - 0.7596 75.96%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.7651 76.51%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.50% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.78% 96.09%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 87.40% 94.00%
CHEMBL3194 P02766 Transthyretin 86.86% 90.71%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.79% 99.17%
CHEMBL3401 O75469 Pregnane X receptor 85.44% 94.73%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.07% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.99% 89.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 84.25% 99.15%
CHEMBL3714130 P46095 G-protein coupled receptor 6 83.31% 97.36%
CHEMBL1951 P21397 Monoamine oxidase A 81.20% 91.49%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.18% 86.33%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 80.10% 86.92%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Diospyros kaki
Mentha suaveolens

Cross-Links

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PubChem 44257157
NPASS NPC282679