(8S,9R,10R,13R,14S,16R,17R)-17-[(2R,5R)-2,6-dihydroxy-6-methyl-3-oxo-5-(7H-purin-6-ylamino)heptan-2-yl]-16-hydroxy-4,4,9,13,14-pentamethyl-2-[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-8,10,12,15,16,17-hexahydro-7H-cyclopenta[a]phenanthrene-3,11-dione

Details

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Internal ID e72dd3bc-31b2-404f-bab5-78b7030c2756
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name (8S,9R,10R,13R,14S,16R,17R)-17-[(2R,5R)-2,6-dihydroxy-6-methyl-3-oxo-5-(7H-purin-6-ylamino)heptan-2-yl]-16-hydroxy-4,4,9,13,14-pentamethyl-2-[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-8,10,12,15,16,17-hexahydro-7H-cyclopenta[a]phenanthrene-3,11-dione
SMILES (Canonical) CC1(C2=CCC3C4(CC(C(C4(CC(=O)C3(C2C=C(C1=O)OC5C(C(C(C(O5)CO)O)O)O)C)C)C(C)(C(=O)CC(C(C)(C)O)NC6=NC=NC7=C6NC=N7)O)O)C)C
SMILES (Isomeric) C[C@@]12C[C@H]([C@@H]([C@]1(CC(=O)[C@@]3([C@H]2CC=C4[C@H]3C=C(C(=O)C4(C)C)O[C@H]5[C@@H]([C@H]([C@H]([C@H](O5)CO)O)O)O)C)C)[C@](C)(C(=O)C[C@H](C(C)(C)O)NC6=NC=NC7=C6NC=N7)O)O
InChI InChI=1S/C41H57N5O12/c1-36(2)18-9-10-23-38(5)13-20(48)31(41(8,56)25(49)12-24(37(3,4)55)46-34-27-33(43-16-42-27)44-17-45-34)39(38,6)14-26(50)40(23,7)19(18)11-21(32(36)54)57-35-30(53)29(52)28(51)22(15-47)58-35/h9,11,16-17,19-20,22-24,28-31,35,47-48,51-53,55-56H,10,12-15H2,1-8H3,(H2,42,43,44,45,46)/t19-,20-,22-,23+,24-,28+,29+,30-,31+,35-,38+,39-,40+,41+/m1/s1
InChI Key MREUELDSJSOJLT-UXSHJATCSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C41H57N5O12
Molecular Weight 811.90 g/mol
Exact Mass 811.40037227 g/mol
Topological Polar Surface Area (TPSA) 278.00 Ų
XlogP 1.40
Atomic LogP (AlogP) 0.86
H-Bond Acceptor 16
H-Bond Donor 9
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (8S,9R,10R,13R,14S,16R,17R)-17-[(2R,5R)-2,6-dihydroxy-6-methyl-3-oxo-5-(7H-purin-6-ylamino)heptan-2-yl]-16-hydroxy-4,4,9,13,14-pentamethyl-2-[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-8,10,12,15,16,17-hexahydro-7H-cyclopenta[a]phenanthrene-3,11-dione

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9201 92.01%
Caco-2 - 0.8583 85.83%
Blood Brain Barrier - 0.8000 80.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.3421 34.21%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8364 83.64%
OATP1B3 inhibitior + 0.9315 93.15%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.7472 74.72%
P-glycoprotein inhibitior + 0.7465 74.65%
P-glycoprotein substrate + 0.6585 65.85%
CYP3A4 substrate + 0.7376 73.76%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8689 86.89%
CYP3A4 inhibition - 0.9079 90.79%
CYP2C9 inhibition - 0.8280 82.80%
CYP2C19 inhibition - 0.8253 82.53%
CYP2D6 inhibition - 0.9010 90.10%
CYP1A2 inhibition - 0.7916 79.16%
CYP2C8 inhibition + 0.7694 76.94%
CYP inhibitory promiscuity - 0.7565 75.65%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9100 91.00%
Carcinogenicity (trinary) Non-required 0.4897 48.97%
Eye corrosion - 0.9832 98.32%
Eye irritation - 0.9049 90.49%
Skin irritation - 0.7447 74.47%
Skin corrosion - 0.9233 92.33%
Ames mutagenesis - 0.6100 61.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6886 68.86%
Micronuclear + 0.7700 77.00%
Hepatotoxicity - 0.5765 57.65%
skin sensitisation - 0.8342 83.42%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity + 0.9375 93.75%
Nephrotoxicity + 0.4910 49.10%
Acute Oral Toxicity (c) III 0.6236 62.36%
Estrogen receptor binding + 0.7351 73.51%
Androgen receptor binding + 0.7652 76.52%
Thyroid receptor binding + 0.6179 61.79%
Glucocorticoid receptor binding + 0.7790 77.90%
Aromatase binding + 0.6431 64.31%
PPAR gamma + 0.7774 77.74%
Honey bee toxicity - 0.6362 63.62%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.9762 97.62%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 99.10% 85.14%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.96% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.66% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 98.04% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.93% 97.09%
CHEMBL2581 P07339 Cathepsin D 95.59% 98.95%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.07% 97.25%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 94.66% 89.34%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 93.71% 99.23%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 93.17% 94.00%
CHEMBL3401 O75469 Pregnane X receptor 92.93% 94.73%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.50% 95.56%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 88.74% 96.77%
CHEMBL4208 P20618 Proteasome component C5 84.12% 90.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.18% 100.00%
CHEMBL2243 O00519 Anandamide amidohydrolase 82.80% 97.53%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.34% 89.00%
CHEMBL290 Q13370 Phosphodiesterase 3B 82.01% 94.00%
CHEMBL1937 Q92769 Histone deacetylase 2 81.78% 94.75%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 81.77% 91.03%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.65% 95.89%
CHEMBL2535 P11166 Glucose transporter 81.43% 98.75%
CHEMBL218 P21554 Cannabinoid CB1 receptor 80.75% 96.61%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 80.41% 96.90%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Cucurbita pepo

Cross-Links

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PubChem 162996245
LOTUS LTS0086462
wikiData Q105170523