(1R)-1-[(2E)-3,7-dimethylocta-2,6-dienyl]-3,6,8-trihydroxy-1,5-bis(3-methylbut-2-enyl)xanthene-2,9-dione

Details

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Internal ID 8d9040cc-7e1b-4fc4-bb10-375b3e788d2b
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name (1R)-1-[(2E)-3,7-dimethylocta-2,6-dienyl]-3,6,8-trihydroxy-1,5-bis(3-methylbut-2-enyl)xanthene-2,9-dione
SMILES (Canonical) CC(=CCCC(=CCC1(C2=C(C=C(C1=O)O)OC3=C(C(=CC(=C3C2=O)O)O)CC=C(C)C)CC=C(C)C)C)C
SMILES (Isomeric) CC(=CCC/C(=C/C[C@@]1(C2=C(C=C(C1=O)O)OC3=C(C(=CC(=C3C2=O)O)O)CC=C(C)C)CC=C(C)C)/C)C
InChI InChI=1S/C33H40O6/c1-19(2)9-8-10-22(7)14-16-33(15-13-21(5)6)29-27(18-26(36)32(33)38)39-31-23(12-11-20(3)4)24(34)17-25(35)28(31)30(29)37/h9,11,13-14,17-18,34-36H,8,10,12,15-16H2,1-7H3/b22-14+/t33-/m1/s1
InChI Key QBMHDVXSRMSJMY-ALVANARCSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C33H40O6
Molecular Weight 532.70 g/mol
Exact Mass 532.28248899 g/mol
Topological Polar Surface Area (TPSA) 104.00 Ų
XlogP 8.80
Atomic LogP (AlogP) 7.87
H-Bond Acceptor 6
H-Bond Donor 3
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1R)-1-[(2E)-3,7-dimethylocta-2,6-dienyl]-3,6,8-trihydroxy-1,5-bis(3-methylbut-2-enyl)xanthene-2,9-dione

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9585 95.85%
Caco-2 - 0.7973 79.73%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.5143 51.43%
Subcellular localzation Mitochondria 0.6936 69.36%
OATP2B1 inhibitior - 0.5661 56.61%
OATP1B1 inhibitior + 0.8440 84.40%
OATP1B3 inhibitior + 0.8407 84.07%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.6064 60.64%
BSEP inhibitior + 0.9705 97.05%
P-glycoprotein inhibitior + 0.7633 76.33%
P-glycoprotein substrate - 0.5702 57.02%
CYP3A4 substrate + 0.6213 62.13%
CYP2C9 substrate + 0.5976 59.76%
CYP2D6 substrate - 0.8665 86.65%
CYP3A4 inhibition - 0.6903 69.03%
CYP2C9 inhibition + 0.5391 53.91%
CYP2C19 inhibition + 0.5053 50.53%
CYP2D6 inhibition - 0.8305 83.05%
CYP1A2 inhibition + 0.7658 76.58%
CYP2C8 inhibition - 0.5974 59.74%
CYP inhibitory promiscuity - 0.5387 53.87%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.7607 76.07%
Eye corrosion - 0.9921 99.21%
Eye irritation - 0.8150 81.50%
Skin irritation - 0.6962 69.62%
Skin corrosion - 0.9322 93.22%
Ames mutagenesis + 0.5200 52.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8269 82.69%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.5396 53.96%
skin sensitisation - 0.7772 77.72%
Respiratory toxicity + 0.6778 67.78%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity + 0.5126 51.26%
Acute Oral Toxicity (c) III 0.5669 56.69%
Estrogen receptor binding + 0.8087 80.87%
Androgen receptor binding + 0.6862 68.62%
Thyroid receptor binding + 0.5667 56.67%
Glucocorticoid receptor binding + 0.8247 82.47%
Aromatase binding + 0.6804 68.04%
PPAR gamma + 0.8269 82.69%
Honey bee toxicity - 0.7727 77.27%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.18% 91.11%
CHEMBL3401 O75469 Pregnane X receptor 95.92% 94.73%
CHEMBL2581 P07339 Cathepsin D 94.85% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.23% 94.45%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 89.84% 92.08%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.91% 89.00%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 88.16% 89.34%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.66% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.66% 95.56%
CHEMBL3038469 P24941 CDK2/Cyclin A 87.27% 91.38%
CHEMBL1937 Q92769 Histone deacetylase 2 83.71% 94.75%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 82.47% 85.30%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.40% 99.23%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 80.27% 85.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Hypericum monogynum

Cross-Links

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PubChem 163191213
LOTUS LTS0206941
wikiData Q105217917