(2R,3R,4S,5S,6R)-2-[(2R)-4-[(1R,2S,4S,6R,7S,8R,9S,12S,13S,15R,16R,18S)-16-[(2R,3R,4R,5R,6R)-5-[(2S,3R,4S,5R,6R)-3-[(2S,3R,4S,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-5-hydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-6,15-dihydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-6-yl]-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID a3d5ef9c-b998-4af2-acd3-1e11d9bbb156
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2R,3R,4S,5S,6R)-2-[(2R)-4-[(1R,2S,4S,6R,7S,8R,9S,12S,13S,15R,16R,18S)-16-[(2R,3R,4R,5R,6R)-5-[(2S,3R,4S,5R,6R)-3-[(2S,3R,4S,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-5-hydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-6,15-dihydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-6-yl]-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC1C2C(CC3C2(CCC4C3CCC5C4(CC(C(C5)OC6C(C(C(C(O6)CO)OC7C(C(C(C(O7)CO)O)OC8C(C(C(CO8)O)O)O)OC9C(C(C(C(O9)CO)O)OC2C(C(C(CO2)O)O)O)O)O)O)O)C)C)OC1(CCC(C)COC1C(C(C(C(O1)CO)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@H]2[C@H](C[C@@H]3[C@@]2(CC[C@H]4[C@H]3CC[C@@H]5[C@@]4(C[C@H]([C@@H](C5)O[C@H]6[C@@H]([C@H]([C@H]([C@H](O6)CO)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O[C@H]8[C@@H]([C@H]([C@@H](CO8)O)O)O)O[C@H]9[C@@H]([C@H]([C@@H]([C@H](O9)CO)O)O[C@H]2[C@@H]([C@H]([C@@H](CO2)O)O)O)O)O)O)O)C)C)O[C@@]1(CC[C@@H](C)CO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O)O
InChI InChI=1S/C61H102O33/c1-21(18-82-53-46(78)42(74)39(71)32(14-62)86-53)7-10-61(81)22(2)36-31(94-61)12-26-24-6-5-23-11-30(27(66)13-60(23,4)25(24)8-9-59(26,36)3)85-56-47(79)43(75)49(35(17-65)89-56)90-58-52(51(41(73)34(16-64)88-58)92-55-45(77)38(70)29(68)20-84-55)93-57-48(80)50(40(72)33(15-63)87-57)91-54-44(76)37(69)28(67)19-83-54/h21-58,62-81H,5-20H2,1-4H3/t21-,22+,23+,24-,25+,26+,27-,28-,29-,30-,31+,32-,33-,34-,35-,36+,37+,38+,39-,40-,41-,42+,43-,44-,45-,46-,47-,48-,49+,50+,51+,52-,53-,54+,55+,56-,57+,58+,59+,60+,61-/m1/s1
InChI Key NSZHWQBEXCKKNP-RLDBXBKXSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C61H102O33
Molecular Weight 1363.40 g/mol
Exact Mass 1362.6303357 g/mol
Topological Polar Surface Area (TPSA) 525.00 Ų
XlogP -5.50
Atomic LogP (AlogP) -8.06
H-Bond Acceptor 33
H-Bond Donor 20
Rotatable Bonds 20

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3R,4S,5S,6R)-2-[(2R)-4-[(1R,2S,4S,6R,7S,8R,9S,12S,13S,15R,16R,18S)-16-[(2R,3R,4R,5R,6R)-5-[(2S,3R,4S,5R,6R)-3-[(2S,3R,4S,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-5-hydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-6,15-dihydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-6-yl]-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5246 52.46%
Caco-2 - 0.8737 87.37%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.8429 84.29%
Subcellular localzation Mitochondria 0.6174 61.74%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8702 87.02%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior + 0.6250 62.50%
BSEP inhibitior + 0.8116 81.16%
P-glycoprotein inhibitior + 0.7429 74.29%
P-glycoprotein substrate + 0.6251 62.51%
CYP3A4 substrate + 0.7575 75.75%
CYP2C9 substrate - 0.8016 80.16%
CYP2D6 substrate - 0.8288 82.88%
CYP3A4 inhibition - 0.9473 94.73%
CYP2C9 inhibition - 0.9215 92.15%
CYP2C19 inhibition - 0.8997 89.97%
CYP2D6 inhibition - 0.9561 95.61%
CYP1A2 inhibition - 0.9215 92.15%
CYP2C8 inhibition + 0.7167 71.67%
CYP inhibitory promiscuity - 0.9616 96.16%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6223 62.23%
Eye corrosion - 0.9917 99.17%
Eye irritation - 0.9001 90.01%
Skin irritation - 0.6555 65.55%
Skin corrosion - 0.9521 95.21%
Ames mutagenesis - 0.7378 73.78%
Human Ether-a-go-go-Related Gene inhibition + 0.8072 80.72%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.8783 87.83%
skin sensitisation - 0.9420 94.20%
Respiratory toxicity + 0.6778 67.78%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.9611 96.11%
Acute Oral Toxicity (c) I 0.8185 81.85%
Estrogen receptor binding + 0.8626 86.26%
Androgen receptor binding + 0.6986 69.86%
Thyroid receptor binding + 0.5544 55.44%
Glucocorticoid receptor binding + 0.6638 66.38%
Aromatase binding + 0.6610 66.10%
PPAR gamma + 0.7948 79.48%
Honey bee toxicity - 0.5684 56.84%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.7523 75.23%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.39% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.13% 91.11%
CHEMBL218 P21554 Cannabinoid CB1 receptor 97.49% 96.61%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 95.90% 92.86%
CHEMBL226 P30542 Adenosine A1 receptor 95.76% 95.93%
CHEMBL204 P00734 Thrombin 94.83% 96.01%
CHEMBL4302 P08183 P-glycoprotein 1 94.72% 92.98%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.06% 97.09%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 93.82% 96.21%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 93.48% 97.29%
CHEMBL4581 P52732 Kinesin-like protein 1 91.85% 93.18%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.70% 100.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.12% 94.45%
CHEMBL233 P35372 Mu opioid receptor 90.51% 97.93%
CHEMBL237 P41145 Kappa opioid receptor 90.15% 98.10%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 89.42% 95.36%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 88.99% 95.58%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 88.82% 97.86%
CHEMBL221 P23219 Cyclooxygenase-1 88.81% 90.17%
CHEMBL2094135 Q96BI3 Gamma-secretase 88.50% 98.05%
CHEMBL220 P22303 Acetylcholinesterase 88.48% 94.45%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 88.33% 92.78%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 87.85% 95.50%
CHEMBL253 P34972 Cannabinoid CB2 receptor 87.52% 97.25%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 87.21% 96.77%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.74% 95.89%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 86.51% 91.03%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 85.53% 92.88%
CHEMBL206 P03372 Estrogen receptor alpha 85.31% 97.64%
CHEMBL3359 P21462 Formyl peptide receptor 1 84.72% 93.56%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 84.35% 89.05%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 84.31% 97.14%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.26% 95.89%
CHEMBL5255 O00206 Toll-like receptor 4 84.24% 92.50%
CHEMBL2360 P00492 Hypoxanthine-guanine phosphoribosyltransferase 84.15% 87.38%
CHEMBL2996 Q05655 Protein kinase C delta 83.67% 97.79%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 83.56% 96.47%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 83.56% 100.00%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 83.35% 96.38%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.27% 86.33%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 82.68% 96.67%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 82.54% 100.00%
CHEMBL2095194 P08709 Coagulation factor VII/tissue factor 82.14% 99.17%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 81.86% 91.24%
CHEMBL259 P32245 Melanocortin receptor 4 81.75% 95.38%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 81.39% 95.71%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 81.02% 95.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Yucca gloriosa

Cross-Links

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PubChem 162977906
LOTUS LTS0118698
wikiData Q105185315