(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(2S)-4-[(1R,2S,4S,6R,7S,8R,9S,12S,13S,16S,18R)-6-hydroxy-7,9,13-trimethyl-16-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-6-yl]-2-methylbutoxy]oxane-3,4,5-triol

Details

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Internal ID 08c2b60c-b3a1-4bc6-942b-c7ae0d669924
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(2S)-4-[(1R,2S,4S,6R,7S,8R,9S,12S,13S,16S,18R)-6-hydroxy-7,9,13-trimethyl-16-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-6-yl]-2-methylbutoxy]oxane-3,4,5-triol
SMILES (Canonical) CC1C2C(CC3C2(CCC4C3CCC5C4(CCC(C5)OC6C(C(C(C(O6)CO)O)O)O)C)C)OC1(CCC(C)COC7C(C(C(C(O7)CO)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@H]2[C@H](C[C@@H]3[C@@]2(CC[C@H]4[C@H]3CC[C@H]5[C@@]4(CC[C@@H](C5)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)C)C)O[C@@]1(CC[C@H](C)CO[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O)O
InChI InChI=1S/C39H66O14/c1-18(17-49-35-33(46)31(44)29(42)26(15-40)51-35)7-12-39(48)19(2)28-25(53-39)14-24-22-6-5-20-13-21(8-10-37(20,3)23(22)9-11-38(24,28)4)50-36-34(47)32(45)30(43)27(16-41)52-36/h18-36,40-48H,5-17H2,1-4H3/t18-,19-,20+,21-,22+,23-,24-,25-,26+,27+,28-,29+,30+,31-,32-,33+,34+,35+,36+,37-,38-,39+/m0/s1
InChI Key DJKIYSUAUHFEBC-BZDNIGORSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C39H66O14
Molecular Weight 758.90 g/mol
Exact Mass 758.44525677 g/mol
Topological Polar Surface Area (TPSA) 228.00 Ų
XlogP 2.30
Atomic LogP (AlogP) 0.40
H-Bond Acceptor 14
H-Bond Donor 9
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(2S)-4-[(1R,2S,4S,6R,7S,8R,9S,12S,13S,16S,18R)-6-hydroxy-7,9,13-trimethyl-16-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-6-yl]-2-methylbutoxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5246 52.46%
Caco-2 - 0.8768 87.68%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.6174 61.74%
OATP2B1 inhibitior - 0.8626 86.26%
OATP1B1 inhibitior + 0.8874 88.74%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior + 0.6250 62.50%
BSEP inhibitior - 0.7649 76.49%
P-glycoprotein inhibitior + 0.7257 72.57%
P-glycoprotein substrate - 0.5168 51.68%
CYP3A4 substrate + 0.7417 74.17%
CYP2C9 substrate - 0.8016 80.16%
CYP2D6 substrate - 0.8288 82.88%
CYP3A4 inhibition - 0.9473 94.73%
CYP2C9 inhibition - 0.9215 92.15%
CYP2C19 inhibition - 0.8997 89.97%
CYP2D6 inhibition - 0.9561 95.61%
CYP1A2 inhibition - 0.9215 92.15%
CYP2C8 inhibition + 0.5110 51.10%
CYP inhibitory promiscuity - 0.9616 96.16%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6223 62.23%
Eye corrosion - 0.9917 99.17%
Eye irritation - 0.9144 91.44%
Skin irritation - 0.6555 65.55%
Skin corrosion - 0.9521 95.21%
Ames mutagenesis - 0.7278 72.78%
Human Ether-a-go-go-Related Gene inhibition + 0.7643 76.43%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.8252 82.52%
skin sensitisation - 0.9420 94.20%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.8042 80.42%
Acute Oral Toxicity (c) I 0.8185 81.85%
Estrogen receptor binding + 0.7073 70.73%
Androgen receptor binding + 0.5898 58.98%
Thyroid receptor binding - 0.6193 61.93%
Glucocorticoid receptor binding - 0.5272 52.72%
Aromatase binding + 0.6388 63.88%
PPAR gamma + 0.6629 66.29%
Honey bee toxicity - 0.6187 61.87%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.6900 69.00%
Fish aquatic toxicity + 0.7523 75.23%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.16% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.56% 91.11%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 95.51% 92.86%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.45% 97.09%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 94.92% 96.21%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 93.53% 89.05%
CHEMBL237 P41145 Kappa opioid receptor 93.15% 98.10%
CHEMBL220 P22303 Acetylcholinesterase 92.37% 94.45%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.89% 94.45%
CHEMBL218 P21554 Cannabinoid CB1 receptor 90.82% 96.61%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.69% 97.25%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.52% 100.00%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 90.40% 95.36%
CHEMBL2094135 Q96BI3 Gamma-secretase 90.14% 98.05%
CHEMBL2996 Q05655 Protein kinase C delta 89.80% 97.79%
CHEMBL4581 P52732 Kinesin-like protein 1 89.49% 93.18%
CHEMBL4302 P08183 P-glycoprotein 1 88.39% 92.98%
CHEMBL233 P35372 Mu opioid receptor 88.20% 97.93%
CHEMBL226 P30542 Adenosine A1 receptor 88.03% 95.93%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 86.35% 98.46%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 85.95% 96.47%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 85.69% 95.89%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 85.11% 97.29%
CHEMBL206 P03372 Estrogen receptor alpha 84.72% 97.64%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.59% 95.89%
CHEMBL3359 P21462 Formyl peptide receptor 1 83.34% 93.56%
CHEMBL4227 P25090 Lipoxin A4 receptor 83.03% 100.00%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 82.87% 100.00%
CHEMBL204 P00734 Thrombin 82.54% 96.01%
CHEMBL242 Q92731 Estrogen receptor beta 82.31% 98.35%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 82.08% 82.50%
CHEMBL241 Q14432 Phosphodiesterase 3A 81.52% 92.94%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 81.48% 95.50%
CHEMBL5255 O00206 Toll-like receptor 4 80.95% 92.50%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 80.30% 92.32%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.08% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Asparagus filicinus

Cross-Links

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PubChem 66879795
LOTUS LTS0144972
wikiData Q104982342