Berkeleyone C

Details

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Internal ID 65cacdae-e423-4477-a153-bb13b3568d34
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Dicarboxylic acids and derivatives
IUPAC Name 3-[(1R,2S,6S,7S,9R,11S)-11-hydroxy-1-methoxycarbonyl-2,6,9,11-tetramethyl-13-methylidene-10,12-dioxo-5-prop-1-en-2-yl-6-tricyclo[7.3.1.02,7]tridec-4-enyl]propanoic acid
SMILES (Canonical) CC(=C)C1=CCC2(C(C1(C)CCC(=O)O)CC3(C(=C)C2(C(=O)C(C3=O)(C)O)C(=O)OC)C)C
SMILES (Isomeric) CC(=C)C1=CC[C@]2([C@H]([C@]1(C)CCC(=O)O)C[C@@]3(C(=C)[C@]2(C(=O)[C@@](C3=O)(C)O)C(=O)OC)C)C
InChI InChI=1S/C26H34O7/c1-14(2)16-9-12-24(6)17(22(16,4)11-10-18(27)28)13-23(5)15(3)26(24,21(31)33-8)20(30)25(7,32)19(23)29/h9,17,32H,1,3,10-13H2,2,4-8H3,(H,27,28)/t17-,22+,23+,24-,25-,26-/m0/s1
InChI Key HBZLILHFZMWEGE-QFRJCEMRSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C26H34O7
Molecular Weight 458.50 g/mol
Exact Mass 458.23045342 g/mol
Topological Polar Surface Area (TPSA) 118.00 Ų
XlogP 3.30
Atomic LogP (AlogP) 3.41
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 5

Synonyms

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CHEMBL1911630
CHEBI:69027
DTXSID401098395
BDBM50355792
Q27137369
1334495-43-0
5,9-Methanobenzocyclooctene-1-propanoic acid, 1,4,4a,5,6,7,8,9,10,10a-decahydro-7-hydroxy-5-(methoxycarbonyl)-1,4a,7,9-tetramethyl-11-methylene-2-(1-methylethenyl)-6,8-dioxo-, (1S,4aS,5R,7S,9R,10aS)-
rel-3-[(1S,4aS,5R,7S,9R,10aS)-7-hydroxy-5-(methoxycarbonyl)-1,4a,7,9-tetramethyl-11-methylidene-6,8-dioxo-2-(prop-1-en-2-yl)-1,4,4a,5,6,7,8,9,10,10a-decahydro-5,9-methanobenzo[8]annulen-1-yl]propanoic acid

2D Structure

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2D Structure of Berkeleyone C

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9802 98.02%
Caco-2 - 0.6073 60.73%
Blood Brain Barrier + 0.5250 52.50%
Human oral bioavailability + 0.5143 51.43%
Subcellular localzation Mitochondria 0.7736 77.36%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8701 87.01%
OATP1B3 inhibitior - 0.2701 27.01%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.7521 75.21%
BSEP inhibitior + 0.6034 60.34%
P-glycoprotein inhibitior - 0.5716 57.16%
P-glycoprotein substrate + 0.5346 53.46%
CYP3A4 substrate + 0.6566 65.66%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8964 89.64%
CYP3A4 inhibition - 0.6233 62.33%
CYP2C9 inhibition - 0.8559 85.59%
CYP2C19 inhibition - 0.7762 77.62%
CYP2D6 inhibition - 0.9522 95.22%
CYP1A2 inhibition - 0.8217 82.17%
CYP2C8 inhibition + 0.5545 55.45%
CYP inhibitory promiscuity - 0.9547 95.47%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9643 96.43%
Carcinogenicity (trinary) Non-required 0.7006 70.06%
Eye corrosion - 0.9924 99.24%
Eye irritation - 0.8540 85.40%
Skin irritation + 0.5743 57.43%
Skin corrosion - 0.9527 95.27%
Ames mutagenesis - 0.6464 64.64%
Human Ether-a-go-go-Related Gene inhibition - 0.4048 40.48%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.5664 56.64%
skin sensitisation - 0.8219 82.19%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity + 0.8125 81.25%
Nephrotoxicity - 0.7640 76.40%
Acute Oral Toxicity (c) I 0.3071 30.71%
Estrogen receptor binding + 0.5268 52.68%
Androgen receptor binding + 0.6609 66.09%
Thyroid receptor binding + 0.6292 62.92%
Glucocorticoid receptor binding + 0.6393 63.93%
Aromatase binding + 0.6919 69.19%
PPAR gamma + 0.5867 58.67%
Honey bee toxicity - 0.7633 76.33%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.7800 78.00%
Fish aquatic toxicity + 0.9949 99.49%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1909490 P01584 Interleukin-1 beta 37800 nM
IC50
PMID: 21916432

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.60% 96.09%
CHEMBL4040 P28482 MAP kinase ERK2 97.53% 83.82%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.85% 91.11%
CHEMBL2581 P07339 Cathepsin D 96.12% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.60% 85.14%
CHEMBL340 P08684 Cytochrome P450 3A4 91.43% 91.19%
CHEMBL1951 P21397 Monoamine oxidase A 90.45% 91.49%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.28% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.62% 94.45%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 80.95% 94.33%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 80.03% 91.07%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Clibadium microcephalum
Globularia nudicaulis
Helianthus pumilus
Leucas aspera
Stemona parviflora

Cross-Links

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PubChem 57401571
NPASS NPC269492
ChEMBL CHEMBL1911630
LOTUS LTS0042251
wikiData Q27137369