Marsdenoside B

Details

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Internal ID 65daf8cf-c4fb-4a14-94a8-d7b0af2e61c9
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid esters
IUPAC Name [(1S,3R,6R,7S,8S,9S,10S,11S,14S,16S)-6-acetyl-14-[(2R,4R,5R,6R)-5-[(2S,3R,4R,5R,6R)-3,5-dihydroxy-4-methoxy-6-methyloxan-2-yl]oxy-4-methoxy-6-methyloxan-2-yl]oxy-7,11-dimethyl-8-[(E)-2-methylbut-2-enoyl]oxy-2-oxapentacyclo[8.8.0.01,3.03,7.011,16]octadecan-9-yl] (E)-2-methylbut-2-enoate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C45H68O14/c1-12-22(3)39(49)56-36-37-42(8)17-15-28(55-31-21-30(51-10)34(26(7)53-31)57-41-33(48)35(52-11)32(47)25(6)54-41)20-27(42)14-18-44(37)45(59-44)19-16-29(24(5)46)43(45,9)38(36)58-40(50)23(4)13-2/h12-13,25-38,41,47-48H,14-21H2,1-11H3/b22-12+,23-13+/t25-,26-,27+,28+,29+,30-,31+,32-,33-,34-,35-,36+,37-,38-,41+,42+,43+,44+,45-/m1/s1
InChI Key VQJMXGXETFHHGG-RNHLGJFBSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C45H68O14
Molecular Weight 833.00 g/mol
Exact Mass 832.46090684 g/mol
Topological Polar Surface Area (TPSA) 178.00 Ų
XlogP 4.30
Atomic LogP (AlogP) 4.89
H-Bond Acceptor 14
H-Bond Donor 2
Rotatable Bonds 11

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Marsdenoside B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9179 91.79%
Caco-2 - 0.8635 86.35%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.6374 63.74%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8422 84.22%
OATP1B3 inhibitior + 0.9725 97.25%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.7521 75.21%
BSEP inhibitior + 0.9655 96.55%
P-glycoprotein inhibitior + 0.7819 78.19%
P-glycoprotein substrate + 0.6748 67.48%
CYP3A4 substrate + 0.7421 74.21%
CYP2C9 substrate - 0.8086 80.86%
CYP2D6 substrate - 0.8918 89.18%
CYP3A4 inhibition - 0.8804 88.04%
CYP2C9 inhibition - 0.8874 88.74%
CYP2C19 inhibition - 0.9165 91.65%
CYP2D6 inhibition - 0.9444 94.44%
CYP1A2 inhibition - 0.7600 76.00%
CYP2C8 inhibition + 0.5745 57.45%
CYP inhibitory promiscuity - 0.9381 93.81%
UGT catelyzed + 1.0000 100.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6031 60.31%
Eye corrosion - 0.9897 98.97%
Eye irritation - 0.9089 90.89%
Skin irritation - 0.5819 58.19%
Skin corrosion - 0.9162 91.62%
Ames mutagenesis - 0.6032 60.32%
Human Ether-a-go-go-Related Gene inhibition + 0.7242 72.42%
Micronuclear - 0.5700 57.00%
Hepatotoxicity - 0.7000 70.00%
skin sensitisation - 0.8231 82.31%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity + 0.8125 81.25%
Nephrotoxicity + 0.6479 64.79%
Acute Oral Toxicity (c) IV 0.3210 32.10%
Estrogen receptor binding + 0.7768 77.68%
Androgen receptor binding + 0.7376 73.76%
Thyroid receptor binding - 0.4885 48.85%
Glucocorticoid receptor binding + 0.7741 77.41%
Aromatase binding + 0.6742 67.42%
PPAR gamma + 0.7697 76.97%
Honey bee toxicity - 0.6132 61.32%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5645 56.45%
Fish aquatic toxicity + 0.9614 96.14%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.84% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.14% 96.09%
CHEMBL4302 P08183 P-glycoprotein 1 93.58% 92.98%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.14% 94.45%
CHEMBL340 P08684 Cytochrome P450 3A4 92.22% 91.19%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.12% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.13% 100.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 88.38% 92.94%
CHEMBL325 Q13547 Histone deacetylase 1 88.37% 95.92%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.99% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.34% 95.89%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.88% 99.23%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 85.32% 95.17%
CHEMBL253 P34972 Cannabinoid CB2 receptor 84.82% 97.25%
CHEMBL5255 O00206 Toll-like receptor 4 84.62% 92.50%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 84.25% 97.14%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 84.07% 96.38%
CHEMBL1937 Q92769 Histone deacetylase 2 83.57% 94.75%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 83.38% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.31% 86.33%
CHEMBL3714130 P46095 G-protein coupled receptor 6 83.16% 97.36%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 82.85% 91.07%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 81.57% 91.71%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 80.96% 97.31%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 80.67% 94.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.54% 94.00%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 80.30% 95.36%
CHEMBL3310 Q96DB2 Histone deacetylase 11 80.20% 88.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gongronemopsis tenacissima

Cross-Links

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PubChem 101743838
LOTUS LTS0066010
wikiData Q105291304