Arvenin IV

Details

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Internal ID 442bf601-d5fa-44c4-ac2a-715617403db8
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name (2S,8S,9R,10R,13R,14S,16R)-17-[(2R)-2,6-dihydroxy-6-methyl-3-oxoheptan-2-yl]-16-hydroxy-4,4,9,13,14-pentamethyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,7,8,10,12,15,16,17-octahydro-1H-cyclopenta[a]phenanthrene-3,11-dione
SMILES (Canonical) CC1(C2=CCC3C4(CC(C(C4(CC(=O)C3(C2CC(C1=O)OC5C(C(C(C(O5)CO)O)O)O)C)C)C(C)(C(=O)CCC(C)(C)O)O)O)C)C
SMILES (Isomeric) C[C@@]12C[C@H](C([C@]1(CC(=O)[C@@]3([C@H]2CC=C4[C@H]3C[C@@H](C(=O)C4(C)C)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)C)C)[C@](C)(C(=O)CCC(C)(C)O)O)O
InChI InChI=1S/C36H56O12/c1-31(2,45)12-11-23(39)36(8,46)28-19(38)14-33(5)22-10-9-17-18(35(22,7)24(40)15-34(28,33)6)13-20(29(44)32(17,3)4)47-30-27(43)26(42)25(41)21(16-37)48-30/h9,18-22,25-28,30,37-38,41-43,45-46H,10-16H2,1-8H3/t18-,19-,20+,21-,22+,25-,26+,27-,28?,30-,33+,34-,35+,36+/m1/s1
InChI Key NWOBCRRKTPFKMK-WQIUHJNMSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C36H56O12
Molecular Weight 680.80 g/mol
Exact Mass 680.37717722 g/mol
Topological Polar Surface Area (TPSA) 211.00 Ų
XlogP 0.50
Atomic LogP (AlogP) 0.98
H-Bond Acceptor 12
H-Bond Donor 7
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Arvenin IV

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8868 88.68%
Caco-2 - 0.8557 85.57%
Blood Brain Barrier + 0.5250 52.50%
Human oral bioavailability - 0.8857 88.57%
Subcellular localzation Mitochondria 0.8704 87.04%
OATP2B1 inhibitior - 0.8661 86.61%
OATP1B1 inhibitior + 0.8170 81.70%
OATP1B3 inhibitior + 0.8029 80.29%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5600 56.00%
BSEP inhibitior - 0.5000 50.00%
P-glycoprotein inhibitior + 0.7408 74.08%
P-glycoprotein substrate - 0.5523 55.23%
CYP3A4 substrate + 0.7137 71.37%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8687 86.87%
CYP3A4 inhibition - 0.7708 77.08%
CYP2C9 inhibition - 0.7891 78.91%
CYP2C19 inhibition - 0.9175 91.75%
CYP2D6 inhibition - 0.9430 94.30%
CYP1A2 inhibition - 0.8441 84.41%
CYP2C8 inhibition + 0.6061 60.61%
CYP inhibitory promiscuity - 0.9293 92.93%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6868 68.68%
Eye corrosion - 0.9907 99.07%
Eye irritation - 0.9161 91.61%
Skin irritation + 0.5434 54.34%
Skin corrosion - 0.9407 94.07%
Ames mutagenesis - 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7219 72.19%
Micronuclear - 0.7500 75.00%
Hepatotoxicity - 0.6177 61.77%
skin sensitisation - 0.9183 91.83%
Respiratory toxicity + 0.6778 67.78%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.7500 75.00%
Nephrotoxicity - 0.6142 61.42%
Acute Oral Toxicity (c) III 0.6943 69.43%
Estrogen receptor binding + 0.6421 64.21%
Androgen receptor binding + 0.7529 75.29%
Thyroid receptor binding - 0.5089 50.89%
Glucocorticoid receptor binding + 0.7482 74.82%
Aromatase binding + 0.7181 71.81%
PPAR gamma + 0.6564 65.64%
Honey bee toxicity - 0.6823 68.23%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.9750 97.50%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.14% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.15% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 97.18% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.09% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.93% 85.14%
CHEMBL2581 P07339 Cathepsin D 92.51% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.40% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.95% 95.56%
CHEMBL218 P21554 Cannabinoid CB1 receptor 88.16% 96.61%
CHEMBL2996 Q05655 Protein kinase C delta 87.89% 97.79%
CHEMBL5255 O00206 Toll-like receptor 4 87.47% 92.50%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 87.24% 96.95%
CHEMBL4208 P20618 Proteasome component C5 86.13% 90.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.18% 86.33%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 84.09% 96.77%
CHEMBL3401 O75469 Pregnane X receptor 83.90% 94.73%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.56% 89.00%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 83.03% 96.21%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.01% 99.23%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 81.87% 86.92%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.66% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Citrullus colocynthis
Neoalsomitra clavigera

Cross-Links

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PubChem 139596332
LOTUS LTS0248750
wikiData Q104393314