alpha-D-GlcpA4Me-(1->2)-beta-D-Xylp-(1->4)-beta-D-Xylp-(1->4)-beta-D-Xylp

Details

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Internal ID 8a2bc3fa-5cdd-42ca-b054-64e5210da7a3
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Oligosaccharides
IUPAC Name (2S,3S,4R,5R,6S)-6-[(2S,3R,4S,5R)-2-[(3R,4R,5R,6S)-4,5-dihydroxy-6-[(3R,4R,5R,6R)-4,5,6-trihydroxyoxan-3-yl]oxyoxan-3-yl]oxy-4,5-dihydroxyoxan-3-yl]oxy-4,5-dihydroxy-3-methoxyoxane-2-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C22H36O19/c1-34-15-11(27)14(30)21(41-17(15)18(31)32)40-16-8(24)5(23)2-36-22(16)39-7-4-37-20(13(29)10(7)26)38-6-3-35-19(33)12(28)9(6)25/h5-17,19-30,33H,2-4H2,1H3,(H,31,32)/t5-,6-,7-,8+,9+,10+,11-,12-,13-,14-,15+,16-,17+,19-,20+,21+,22+/m1/s1
InChI Key DWUMRQPTCMDVJD-NPARFUQOSA-N
Popularity 5 references in papers

Physical and Chemical Properties

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Molecular Formula C22H36O19
Molecular Weight 604.50 g/mol
Exact Mass 604.18507891 g/mol
Topological Polar Surface Area (TPSA) 293.00 Ų
XlogP -6.90
Atomic LogP (AlogP) -7.09
H-Bond Acceptor 18
H-Bond Donor 10
Rotatable Bonds 8

Synonyms

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CHEBI:82694
Q27156230
2-O-alpha-(4-O-methyl-alpha-D-glucuronosyl)-xylotriose
alpha-D-GlcA4Me-(1->2)-beta-D-Xyl-(1->4)-beta-D-Xyl-(1->4)-beta-D-Xyl
4-O-methyl-alpha-D-glucopyranuronosyl-(1->2)-beta-D-xylopyranosyl-(1->4)-beta-D-xylopyranosyl-(1->4)-beta-D-xylopyranose
4-O-methyl-alpha-D-glucuronosyl-(1->2)-beta-D-xylosyl-(1->4)-beta-D-xylosyl-(1->4)-beta-D-xylose

2D Structure

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2D Structure of alpha-D-GlcpA4Me-(1->2)-beta-D-Xylp-(1->4)-beta-D-Xylp-(1->4)-beta-D-Xylp

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8790 87.90%
Caco-2 - 0.8926 89.26%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.7237 72.37%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9077 90.77%
OATP1B3 inhibitior + 0.9539 95.39%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.8754 87.54%
P-glycoprotein inhibitior - 0.6441 64.41%
P-glycoprotein substrate - 0.8292 82.92%
CYP3A4 substrate + 0.6205 62.05%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8812 88.12%
CYP3A4 inhibition - 0.9747 97.47%
CYP2C9 inhibition - 0.9657 96.57%
CYP2C19 inhibition - 0.9571 95.71%
CYP2D6 inhibition - 0.9373 93.73%
CYP1A2 inhibition - 0.9550 95.50%
CYP2C8 inhibition - 0.7706 77.06%
CYP inhibitory promiscuity - 0.9663 96.63%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6610 66.10%
Eye corrosion - 0.9853 98.53%
Eye irritation - 0.9312 93.12%
Skin irritation - 0.8433 84.33%
Skin corrosion - 0.9365 93.65%
Ames mutagenesis - 0.5647 56.47%
Human Ether-a-go-go-Related Gene inhibition - 0.4415 44.15%
Micronuclear - 0.6541 65.41%
Hepatotoxicity - 0.6413 64.13%
skin sensitisation - 0.9425 94.25%
Respiratory toxicity - 0.6889 68.89%
Reproductive toxicity - 0.5778 57.78%
Mitochondrial toxicity - 0.6000 60.00%
Nephrotoxicity - 0.7949 79.49%
Acute Oral Toxicity (c) III 0.6200 62.00%
Estrogen receptor binding + 0.5989 59.89%
Androgen receptor binding - 0.5853 58.53%
Thyroid receptor binding - 0.5834 58.34%
Glucocorticoid receptor binding - 0.4786 47.86%
Aromatase binding + 0.6071 60.71%
PPAR gamma + 0.5664 56.64%
Honey bee toxicity - 0.6577 65.77%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6255 62.55%
Fish aquatic toxicity - 0.8893 88.93%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL340 P08684 Cytochrome P450 3A4 88.46% 91.19%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 87.29% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 86.93% 96.09%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 86.92% 97.33%
CHEMBL1974 P36888 Tyrosine-protein kinase receptor FLT3 86.62% 91.83%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 85.80% 96.77%
CHEMBL2581 P07339 Cathepsin D 84.80% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.56% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.35% 99.23%
CHEMBL1951 P21397 Monoamine oxidase A 83.35% 91.49%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 82.81% 94.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.04% 89.00%
CHEMBL5028 O14672 ADAM10 80.89% 97.50%
CHEMBL5255 O00206 Toll-like receptor 4 80.37% 92.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Saccharum officinarum

Cross-Links

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PubChem 5288379
LOTUS LTS0051392
wikiData Q27156230