(5R,7R,8R,9R,10R,13S,17S)-17-[(2S,3S,5R)-5-[(2S)-3,3-dimethyloxiran-2-yl]-2-methoxyoxolan-3-yl]-7-hydroxy-4,4,8,10,13-pentamethyl-5,6,7,9,11,12,16,17-octahydrocyclopenta[a]phenanthren-3-one

Details

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Internal ID 162f5370-38a9-445f-b306-5d5a0c3cf111
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids > Limonoids
IUPAC Name (5R,7R,8R,9R,10R,13S,17S)-17-[(2S,3S,5R)-5-[(2S)-3,3-dimethyloxiran-2-yl]-2-methoxyoxolan-3-yl]-7-hydroxy-4,4,8,10,13-pentamethyl-5,6,7,9,11,12,16,17-octahydrocyclopenta[a]phenanthren-3-one
SMILES (Canonical) CC1(C2CC(C3(C(C2(C=CC1=O)C)CCC4(C3=CCC4C5CC(OC5OC)C6C(O6)(C)C)C)C)O)C
SMILES (Isomeric) C[C@@]12CC[C@@H]3[C@]4(C=CC(=O)C([C@@H]4C[C@H]([C@]3(C1=CC[C@H]2[C@@H]5C[C@@H](O[C@@H]5OC)[C@H]6C(O6)(C)C)C)O)(C)C)C
InChI InChI=1S/C31H46O5/c1-27(2)22-16-24(33)31(7)20-10-9-18(17-15-19(35-26(17)34-8)25-28(3,4)36-25)29(20,5)13-11-21(31)30(22,6)14-12-23(27)32/h10,12,14,17-19,21-22,24-26,33H,9,11,13,15-16H2,1-8H3/t17-,18-,19+,21+,22-,24+,25-,26-,29-,30+,31-/m0/s1
InChI Key HJVGTFSNOJVDMN-RRHJXXRXSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C31H46O5
Molecular Weight 498.70 g/mol
Exact Mass 498.33452456 g/mol
Topological Polar Surface Area (TPSA) 68.30 Ų
XlogP 5.20
Atomic LogP (AlogP) 5.46
H-Bond Acceptor 5
H-Bond Donor 1
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (5R,7R,8R,9R,10R,13S,17S)-17-[(2S,3S,5R)-5-[(2S)-3,3-dimethyloxiran-2-yl]-2-methoxyoxolan-3-yl]-7-hydroxy-4,4,8,10,13-pentamethyl-5,6,7,9,11,12,16,17-octahydrocyclopenta[a]phenanthren-3-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9901 99.01%
Caco-2 - 0.6815 68.15%
Blood Brain Barrier + 0.7250 72.50%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.7719 77.19%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8457 84.57%
OATP1B3 inhibitior + 0.9393 93.93%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.6750 67.50%
BSEP inhibitior + 0.8191 81.91%
P-glycoprotein inhibitior + 0.6709 67.09%
P-glycoprotein substrate - 0.5841 58.41%
CYP3A4 substrate + 0.7415 74.15%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8731 87.31%
CYP3A4 inhibition + 0.5429 54.29%
CYP2C9 inhibition - 0.7459 74.59%
CYP2C19 inhibition - 0.7798 77.98%
CYP2D6 inhibition - 0.9256 92.56%
CYP1A2 inhibition - 0.7254 72.54%
CYP2C8 inhibition + 0.6371 63.71%
CYP inhibitory promiscuity - 0.8582 85.82%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Danger 0.4207 42.07%
Eye corrosion - 0.9887 98.87%
Eye irritation - 0.9501 95.01%
Skin irritation - 0.5445 54.45%
Skin corrosion - 0.9252 92.52%
Ames mutagenesis - 0.6900 69.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3899 38.99%
Micronuclear - 0.5700 57.00%
Hepatotoxicity - 0.6250 62.50%
skin sensitisation - 0.8263 82.63%
Respiratory toxicity + 0.8667 86.67%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity + 0.4599 45.99%
Acute Oral Toxicity (c) I 0.4686 46.86%
Estrogen receptor binding + 0.7608 76.08%
Androgen receptor binding + 0.7149 71.49%
Thyroid receptor binding + 0.6747 67.47%
Glucocorticoid receptor binding + 0.7113 71.13%
Aromatase binding + 0.7124 71.24%
PPAR gamma + 0.6883 68.83%
Honey bee toxicity - 0.7279 72.79%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.5400 54.00%
Fish aquatic toxicity + 0.9831 98.31%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.17% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.81% 85.14%
CHEMBL1994 P08235 Mineralocorticoid receptor 93.70% 100.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.22% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.61% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.06% 97.09%
CHEMBL1871 P10275 Androgen Receptor 89.74% 96.43%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.93% 99.23%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.82% 94.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.83% 94.45%
CHEMBL1937 Q92769 Histone deacetylase 2 82.63% 94.75%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.41% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Turraea pubescens

Cross-Links

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PubChem 71726013
LOTUS LTS0128595
wikiData Q105029471