(2S,3R,4R,5R,6S)-2-[(2R,3S,4S,5R,6R)-4-hydroxy-2-(hydroxymethyl)-6-[[(1R,2S,4S,6Z,7R,8R,9S,12S,13S,16S,18S)-7-hydroxy-7,9,13-trimethyl-6-[(3S)-3-methyl-4-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxybutylidene]-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-16-yl]oxy]-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

Details

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Internal ID 89e94a87-7fbd-410b-adde-9333bcaad8fb
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name (2S,3R,4R,5R,6S)-2-[(2R,3S,4S,5R,6R)-4-hydroxy-2-(hydroxymethyl)-6-[[(1R,2S,4S,6Z,7R,8R,9S,12S,13S,16S,18S)-7-hydroxy-7,9,13-trimethyl-6-[(3S)-3-methyl-4-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxybutylidene]-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-16-yl]oxy]-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(OC(C(C2O)OC3C(C(C(C(O3)C)O)O)O)OC4CCC5(C(C4)CCC6C5CCC7(C6CC8C7C(C(=CCC(C)COC9C(C(C(C(O9)CO)O)O)O)O8)(C)O)C)C)CO)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@@H]2[C@H](O[C@H]([C@@H]([C@H]2O)O[C@H]3[C@@H]([C@@H]([C@H]([C@@H](O3)C)O)O)O)O[C@H]4CC[C@]5([C@H](C4)CC[C@@H]6[C@@H]5CC[C@]7([C@H]6C[C@H]8[C@@H]7[C@@](/C(=C/C[C@H](C)CO[C@H]9[C@@H]([C@H]([C@@H]([C@H](O9)CO)O)O)O)/O8)(C)O)C)C)CO)O)O)O
InChI InChI=1S/C51H84O22/c1-20(19-65-45-38(60)37(59)34(56)29(17-52)70-45)7-10-31-51(6,64)44-28(69-31)16-27-25-9-8-23-15-24(11-13-49(23,4)26(25)12-14-50(27,44)5)68-48-43(73-47-40(62)36(58)33(55)22(3)67-47)41(63)42(30(18-53)71-48)72-46-39(61)35(57)32(54)21(2)66-46/h10,20-30,32-48,52-64H,7-9,11-19H2,1-6H3/b31-10-/t20-,21-,22-,23-,24-,25+,26-,27-,28-,29+,30+,32-,33-,34+,35+,36+,37-,38+,39+,40+,41-,42+,43+,44-,45+,46-,47-,48+,49-,50-,51-/m0/s1
InChI Key LBLFKZKGYZPTGD-ALRPXIOKSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C51H84O22
Molecular Weight 1049.20 g/mol
Exact Mass 1048.54542430 g/mol
Topological Polar Surface Area (TPSA) 346.00 Ų
XlogP -1.00
Atomic LogP (AlogP) -1.98
H-Bond Acceptor 22
H-Bond Donor 13
Rotatable Bonds 13

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4R,5R,6S)-2-[(2R,3S,4S,5R,6R)-4-hydroxy-2-(hydroxymethyl)-6-[[(1R,2S,4S,6Z,7R,8R,9S,12S,13S,16S,18S)-7-hydroxy-7,9,13-trimethyl-6-[(3S)-3-methyl-4-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxybutylidene]-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-16-yl]oxy]-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5875 58.75%
Caco-2 - 0.8875 88.75%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.7216 72.16%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8606 86.06%
OATP1B3 inhibitior + 0.9144 91.44%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.5000 50.00%
BSEP inhibitior + 0.6619 66.19%
P-glycoprotein inhibitior + 0.7425 74.25%
P-glycoprotein substrate + 0.5486 54.86%
CYP3A4 substrate + 0.7385 73.85%
CYP2C9 substrate - 0.7984 79.84%
CYP2D6 substrate - 0.8373 83.73%
CYP3A4 inhibition - 0.9613 96.13%
CYP2C9 inhibition - 0.9218 92.18%
CYP2C19 inhibition - 0.9033 90.33%
CYP2D6 inhibition - 0.9457 94.57%
CYP1A2 inhibition - 0.8963 89.63%
CYP2C8 inhibition + 0.6303 63.03%
CYP inhibitory promiscuity - 0.8822 88.22%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6057 60.57%
Eye corrosion - 0.9904 99.04%
Eye irritation - 0.9048 90.48%
Skin irritation - 0.6218 62.18%
Skin corrosion - 0.9494 94.94%
Ames mutagenesis - 0.7432 74.32%
Human Ether-a-go-go-Related Gene inhibition + 0.8152 81.52%
Micronuclear - 0.9000 90.00%
Hepatotoxicity - 0.7500 75.00%
skin sensitisation - 0.9314 93.14%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.7111 71.11%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.9505 95.05%
Acute Oral Toxicity (c) I 0.7336 73.36%
Estrogen receptor binding + 0.8472 84.72%
Androgen receptor binding + 0.7154 71.54%
Thyroid receptor binding + 0.5454 54.54%
Glucocorticoid receptor binding + 0.7342 73.42%
Aromatase binding + 0.6932 69.32%
PPAR gamma + 0.7993 79.93%
Honey bee toxicity - 0.5853 58.53%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.9307 93.07%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.40% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.52% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.07% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.94% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.46% 94.45%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.11% 100.00%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 87.92% 92.86%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.37% 89.00%
CHEMBL226 P30542 Adenosine A1 receptor 87.14% 95.93%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.33% 95.89%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 85.00% 97.29%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 84.78% 91.71%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 84.55% 89.05%
CHEMBL4581 P52732 Kinesin-like protein 1 84.37% 93.18%
CHEMBL4227 P25090 Lipoxin A4 receptor 84.07% 100.00%
CHEMBL237 P41145 Kappa opioid receptor 83.92% 98.10%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 83.55% 96.21%
CHEMBL2996 Q05655 Protein kinase C delta 83.32% 97.79%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 82.61% 95.58%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.95% 96.00%
CHEMBL2094135 Q96BI3 Gamma-secretase 81.64% 98.05%
CHEMBL3359 P21462 Formyl peptide receptor 1 80.60% 93.56%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.52% 95.89%
CHEMBL241 Q14432 Phosphodiesterase 3A 80.08% 92.94%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Allium tuberosum

Cross-Links

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PubChem 101715931
LOTUS LTS0163849
wikiData Q105149427