methyl (2S,3S,4S,5R,6R)-6-[[(3S,4S,4aR,6aR,6bS,8aR,9R,11S,12aS,14aR,14bR)-4-(hydroxymethyl)-11-methoxycarbonyl-4,6a,6b,8a,11,14b-hexamethyl-9-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylate

Details

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Internal ID 8ccbb7f3-5ad1-40b0-a823-e350584d3cdf
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name methyl (2S,3S,4S,5R,6R)-6-[[(3S,4S,4aR,6aR,6bS,8aR,9R,11S,12aS,14aR,14bR)-4-(hydroxymethyl)-11-methoxycarbonyl-4,6a,6b,8a,11,14b-hexamethyl-9-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylate
SMILES (Canonical) CC1C(C(C(C(O1)OC2CC(CC3C2(CCC4(C3=CCC5C4(CCC6C5(CCC(C6(C)CO)OC7C(C(C(C(O7)C(=O)OC)O)O)OC8C(C(C(C(O8)CO)O)O)OC9C(C(C(C(O9)C)O)O)O)C)C)C)C)(C)C(=O)OC)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@@H]2C[C@@](C[C@@H]3[C@]2(CC[C@@]4(C3=CC[C@H]5[C@]4(CC[C@@H]6[C@@]5(CC[C@@H]([C@]6(C)CO)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)C(=O)OC)O)O)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO)O)O)O[C@H]9[C@@H]([C@@H]([C@H]([C@@H](O9)C)O)O)O)C)C)C)C)(C)C(=O)OC)O)O)O
InChI InChI=1S/C56H90O24/c1-23-32(59)35(62)40(67)46(73-23)77-31-20-51(3,50(70)72-10)19-26-25-11-12-29-53(5)15-14-30(54(6,22-58)28(53)13-16-56(29,8)55(25,7)18-17-52(26,31)4)76-49-44(39(66)38(65)42(78-49)45(69)71-9)80-48-43(37(64)34(61)27(21-57)75-48)79-47-41(68)36(63)33(60)24(2)74-47/h11,23-24,26-44,46-49,57-68H,12-22H2,1-10H3/t23-,24-,26-,27+,28+,29+,30-,31+,32-,33-,34+,35+,36+,37-,38-,39-,40+,41+,42-,43+,44+,46-,47-,48-,49+,51-,52+,53-,54+,55+,56+/m0/s1
InChI Key ZTGXFUGGESHWDU-BEMURPLFSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C56H90O24
Molecular Weight 1147.30 g/mol
Exact Mass 1146.58220373 g/mol
Topological Polar Surface Area (TPSA) 369.00 Ų
XlogP 0.40
Atomic LogP (AlogP) -1.20
H-Bond Acceptor 24
H-Bond Donor 12
Rotatable Bonds 12

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (2S,3S,4S,5R,6R)-6-[[(3S,4S,4aR,6aR,6bS,8aR,9R,11S,12aS,14aR,14bR)-4-(hydroxymethyl)-11-methoxycarbonyl-4,6a,6b,8a,11,14b-hexamethyl-9-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6450 64.50%
Caco-2 - 0.8800 88.00%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Mitochondria 0.8410 84.10%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8242 82.42%
OATP1B3 inhibitior - 0.2591 25.91%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.5021 50.21%
BSEP inhibitior + 0.9144 91.44%
P-glycoprotein inhibitior + 0.7477 74.77%
P-glycoprotein substrate - 0.5367 53.67%
CYP3A4 substrate + 0.7391 73.91%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8776 87.76%
CYP3A4 inhibition - 0.9325 93.25%
CYP2C9 inhibition - 0.9274 92.74%
CYP2C19 inhibition - 0.9129 91.29%
CYP2D6 inhibition - 0.9549 95.49%
CYP1A2 inhibition - 0.8851 88.51%
CYP2C8 inhibition + 0.7511 75.11%
CYP inhibitory promiscuity - 0.9658 96.58%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6068 60.68%
Eye corrosion - 0.9889 98.89%
Eye irritation - 0.8996 89.96%
Skin irritation - 0.6260 62.60%
Skin corrosion - 0.9468 94.68%
Ames mutagenesis - 0.8000 80.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7987 79.87%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.8375 83.75%
skin sensitisation - 0.9199 91.99%
Respiratory toxicity - 0.6000 60.00%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.6108 61.08%
Acute Oral Toxicity (c) III 0.6420 64.20%
Estrogen receptor binding + 0.7708 77.08%
Androgen receptor binding + 0.7485 74.85%
Thyroid receptor binding + 0.5854 58.54%
Glucocorticoid receptor binding + 0.8000 80.00%
Aromatase binding + 0.6344 63.44%
PPAR gamma + 0.8290 82.90%
Honey bee toxicity - 0.6559 65.59%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.9298 92.98%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.25% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.11% 96.09%
CHEMBL3714130 P46095 G-protein coupled receptor 6 94.76% 97.36%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.59% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.76% 95.56%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 86.00% 94.33%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 85.57% 95.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.46% 94.45%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 84.97% 91.07%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.55% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.20% 95.89%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.71% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.33% 100.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.80% 94.00%
CHEMBL2782 P35610 Acyl coenzyme A:cholesterol acyltransferase 1 82.17% 91.65%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 81.86% 86.92%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.13% 95.89%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.77% 99.17%
CHEMBL5028 O14672 ADAM10 80.49% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Robinia pseudoacacia

Cross-Links

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PubChem 163089003
LOTUS LTS0108435
wikiData Q105382915