(2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-[[(1R,4R,6R)-4-hydroxy-1,3,3-trimethyl-2-oxabicyclo[2.2.2]octan-6-yl]oxy]oxane-3,4,5-triol

Details

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Internal ID 7b59c5f2-fd9f-416e-a922-20244f290648
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-[[(1R,4R,6R)-4-hydroxy-1,3,3-trimethyl-2-oxabicyclo[2.2.2]octan-6-yl]oxy]oxane-3,4,5-triol
SMILES (Canonical) CC1(C2(CCC(O1)(C(C2)OC3C(C(C(C(O3)CO)O)O)O)C)O)C
SMILES (Isomeric) C[C@@]12CC[C@@](C[C@H]1O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)(C(O2)(C)C)O
InChI InChI=1S/C16H28O8/c1-14(2)16(21)5-4-15(3,24-14)9(6-16)23-13-12(20)11(19)10(18)8(7-17)22-13/h8-13,17-21H,4-7H2,1-3H3/t8-,9-,10-,11+,12-,13+,15-,16-/m1/s1
InChI Key KTPRFNBCDRCCJW-WLEUBNQJSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C16H28O8
Molecular Weight 348.39 g/mol
Exact Mass 348.17841785 g/mol
Topological Polar Surface Area (TPSA) 129.00 Ų
XlogP -1.40
Atomic LogP (AlogP) -1.35
H-Bond Acceptor 8
H-Bond Donor 5
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-[[(1R,4R,6R)-4-hydroxy-1,3,3-trimethyl-2-oxabicyclo[2.2.2]octan-6-yl]oxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6407 64.07%
Caco-2 - 0.7832 78.32%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.7275 72.75%
OATP2B1 inhibitior - 0.8554 85.54%
OATP1B1 inhibitior + 0.9006 90.06%
OATP1B3 inhibitior + 0.8124 81.24%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior - 0.9012 90.12%
P-glycoprotein inhibitior - 0.8810 88.10%
P-glycoprotein substrate - 0.9370 93.70%
CYP3A4 substrate + 0.6287 62.87%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8513 85.13%
CYP3A4 inhibition - 0.9206 92.06%
CYP2C9 inhibition - 0.8812 88.12%
CYP2C19 inhibition - 0.9191 91.91%
CYP2D6 inhibition - 0.9610 96.10%
CYP1A2 inhibition - 0.9092 90.92%
CYP2C8 inhibition - 0.7824 78.24%
CYP inhibitory promiscuity - 0.9830 98.30%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.7187 71.87%
Eye corrosion - 0.9904 99.04%
Eye irritation - 0.9767 97.67%
Skin irritation - 0.7321 73.21%
Skin corrosion - 0.9602 96.02%
Ames mutagenesis - 0.6400 64.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4848 48.48%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.8298 82.98%
skin sensitisation - 0.9187 91.87%
Respiratory toxicity - 0.5778 57.78%
Reproductive toxicity + 0.5333 53.33%
Mitochondrial toxicity - 0.6625 66.25%
Nephrotoxicity + 0.5882 58.82%
Acute Oral Toxicity (c) III 0.4768 47.68%
Estrogen receptor binding + 0.6939 69.39%
Androgen receptor binding - 0.5779 57.79%
Thyroid receptor binding + 0.7142 71.42%
Glucocorticoid receptor binding + 0.6970 69.70%
Aromatase binding + 0.7467 74.67%
PPAR gamma + 0.6191 61.91%
Honey bee toxicity - 0.8142 81.42%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.7700 77.00%
Fish aquatic toxicity + 0.7794 77.94%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.94% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.78% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.18% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.71% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.91% 86.33%
CHEMBL220 P22303 Acetylcholinesterase 85.68% 94.45%
CHEMBL218 P21554 Cannabinoid CB1 receptor 84.87% 96.61%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 84.40% 86.92%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 84.17% 95.50%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 83.90% 100.00%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 82.45% 96.21%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.78% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.58% 95.89%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 80.93% 92.32%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Foeniculum vulgare

Cross-Links

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PubChem 10783914
LOTUS LTS0089480
wikiData Q105145914