(4R)-3-(hydroxymethyl)-5,5-dimethyl-4-[(3R)-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxybutyl]cyclohex-2-en-1-one

Details

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Internal ID 9c7f40a2-6b3e-4ab3-bf91-1e265d4a905d
Taxonomy Lipids and lipid-like molecules > Fatty Acyls > Fatty acyl glycosides > Fatty acyl glycosides of mono- and disaccharides
IUPAC Name (4R)-3-(hydroxymethyl)-5,5-dimethyl-4-[(3R)-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxybutyl]cyclohex-2-en-1-one
SMILES (Canonical) CC(CCC1C(=CC(=O)CC1(C)C)CO)OC2C(C(C(C(O2)COC3C(C(C(C(O3)CO)O)O)O)O)O)O
SMILES (Isomeric) C[C@H](CC[C@H]1C(=CC(=O)CC1(C)C)CO)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)O)O)O
InChI InChI=1S/C25H42O13/c1-11(4-5-14-12(8-26)6-13(28)7-25(14,2)3)36-24-22(34)20(32)18(30)16(38-24)10-35-23-21(33)19(31)17(29)15(9-27)37-23/h6,11,14-24,26-27,29-34H,4-5,7-10H2,1-3H3/t11-,14+,15-,16-,17-,18-,19+,20+,21-,22-,23-,24-/m1/s1
InChI Key SMOPBNVVMHQRMR-ARXKMKHRSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C25H42O13
Molecular Weight 550.60 g/mol
Exact Mass 550.26254139 g/mol
Topological Polar Surface Area (TPSA) 216.00 Ų
XlogP -3.10
Atomic LogP (AlogP) -2.67
H-Bond Acceptor 13
H-Bond Donor 8
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (4R)-3-(hydroxymethyl)-5,5-dimethyl-4-[(3R)-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxybutyl]cyclohex-2-en-1-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5369 53.69%
Caco-2 - 0.8716 87.16%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.9016 90.16%
OATP2B1 inhibitior - 0.7230 72.30%
OATP1B1 inhibitior + 0.8694 86.94%
OATP1B3 inhibitior - 0.3297 32.97%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.6276 62.76%
BSEP inhibitior - 0.7574 75.74%
P-glycoprotein inhibitior - 0.5876 58.76%
P-glycoprotein substrate - 0.6583 65.83%
CYP3A4 substrate + 0.6505 65.05%
CYP2C9 substrate - 0.7958 79.58%
CYP2D6 substrate - 0.8855 88.55%
CYP3A4 inhibition - 0.9619 96.19%
CYP2C9 inhibition - 0.8374 83.74%
CYP2C19 inhibition - 0.8742 87.42%
CYP2D6 inhibition - 0.9384 93.84%
CYP1A2 inhibition - 0.8909 89.09%
CYP2C8 inhibition - 0.7926 79.26%
CYP inhibitory promiscuity - 0.9388 93.88%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6729 67.29%
Eye corrosion - 0.9901 99.01%
Eye irritation - 0.9482 94.82%
Skin irritation - 0.7181 71.81%
Skin corrosion - 0.9609 96.09%
Ames mutagenesis - 0.5600 56.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6872 68.72%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.7407 74.07%
skin sensitisation - 0.8699 86.99%
Respiratory toxicity + 0.5667 56.67%
Reproductive toxicity + 0.6556 65.56%
Mitochondrial toxicity - 0.6250 62.50%
Nephrotoxicity + 0.6364 63.64%
Acute Oral Toxicity (c) III 0.6965 69.65%
Estrogen receptor binding + 0.6458 64.58%
Androgen receptor binding - 0.5126 51.26%
Thyroid receptor binding + 0.5328 53.28%
Glucocorticoid receptor binding - 0.4909 49.09%
Aromatase binding + 0.6988 69.88%
PPAR gamma + 0.5373 53.73%
Honey bee toxicity - 0.7980 79.80%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.7550 75.50%
Fish aquatic toxicity + 0.9478 94.78%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.20% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.77% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.73% 96.09%
CHEMBL2581 P07339 Cathepsin D 95.62% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.45% 97.09%
CHEMBL220 P22303 Acetylcholinesterase 90.16% 94.45%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.77% 94.45%
CHEMBL226 P30542 Adenosine A1 receptor 89.14% 95.93%
CHEMBL218 P21554 Cannabinoid CB1 receptor 87.08% 96.61%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 86.99% 85.14%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.94% 95.56%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 84.57% 94.23%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.56% 100.00%
CHEMBL3401 O75469 Pregnane X receptor 82.90% 94.73%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 82.39% 83.57%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.71% 96.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.84% 89.00%
CHEMBL2996 Q05655 Protein kinase C delta 80.74% 97.79%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ornithogalum umbellatum

Cross-Links

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PubChem 162896712
LOTUS LTS0083822
wikiData Q105256066