2-[4,5-Dihydroxy-6-(hydroxymethyl)-2-(8-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl)oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

Details

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Internal ID 428dc0db-03c5-48b9-9767-2a9f68aaa33f
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name 2-[4,5-dihydroxy-6-(hydroxymethyl)-2-(8-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl)oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3(C(O2)CC4C3(CCC5C4CC=C6C5(CCC(C6)OC7C(C(C(C(O7)CO)O)O)OC8C(C(C(C(O8)C)O)O)O)C)C)O)C)OC1
SMILES (Isomeric) CC1CCC2(C(C3(C(O2)CC4C3(CCC5C4CC=C6C5(CCC(C6)OC7C(C(C(C(O7)CO)O)O)OC8C(C(C(C(O8)C)O)O)O)C)C)O)C)OC1
InChI InChI=1S/C39H62O13/c1-18-8-13-38(47-17-18)20(3)39(46)27(52-38)15-25-23-7-6-21-14-22(9-11-36(21,4)24(23)10-12-37(25,39)5)49-35-33(31(44)29(42)26(16-40)50-35)51-34-32(45)30(43)28(41)19(2)48-34/h6,18-20,22-35,40-46H,7-17H2,1-5H3
InChI Key WHWWQGPCTUQCMN-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C39H62O13
Molecular Weight 738.90 g/mol
Exact Mass 738.41904203 g/mol
Topological Polar Surface Area (TPSA) 197.00 Ų
XlogP 1.70
Atomic LogP (AlogP) 1.50
H-Bond Acceptor 13
H-Bond Donor 7
Rotatable Bonds 5

Synonyms

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CID 71307571

2D Structure

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2D Structure of 2-[4,5-Dihydroxy-6-(hydroxymethyl)-2-(8-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl)oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7196 71.96%
Caco-2 - 0.8837 88.37%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.8571 85.71%
Subcellular localzation Mitochondria 0.7739 77.39%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8497 84.97%
OATP1B3 inhibitior + 0.8663 86.63%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior + 0.7182 71.82%
P-glycoprotein inhibitior + 0.7088 70.88%
P-glycoprotein substrate + 0.5976 59.76%
CYP3A4 substrate + 0.7374 73.74%
CYP2C9 substrate - 0.7915 79.15%
CYP2D6 substrate - 0.8348 83.48%
CYP3A4 inhibition - 0.9460 94.60%
CYP2C9 inhibition - 0.9118 91.18%
CYP2C19 inhibition - 0.9113 91.13%
CYP2D6 inhibition - 0.9360 93.60%
CYP1A2 inhibition - 0.8848 88.48%
CYP2C8 inhibition + 0.7703 77.03%
CYP inhibitory promiscuity - 0.8774 87.74%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5291 52.91%
Eye corrosion - 0.9892 98.92%
Eye irritation - 0.9213 92.13%
Skin irritation - 0.5662 56.62%
Skin corrosion - 0.9438 94.38%
Ames mutagenesis - 0.9070 90.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7756 77.56%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.9750 97.50%
skin sensitisation - 0.9240 92.40%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.7955 79.55%
Acute Oral Toxicity (c) III 0.4459 44.59%
Estrogen receptor binding + 0.8032 80.32%
Androgen receptor binding + 0.7594 75.94%
Thyroid receptor binding - 0.6046 60.46%
Glucocorticoid receptor binding - 0.5100 51.00%
Aromatase binding + 0.6736 67.36%
PPAR gamma + 0.6953 69.53%
Honey bee toxicity - 0.5919 59.19%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9442 94.42%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.43% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.34% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 97.88% 95.93%
CHEMBL253 P34972 Cannabinoid CB2 receptor 96.76% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.97% 97.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 93.85% 100.00%
CHEMBL2243 O00519 Anandamide amidohydrolase 90.28% 97.53%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.70% 89.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 88.67% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.40% 86.33%
CHEMBL1937 Q92769 Histone deacetylase 2 87.60% 94.75%
CHEMBL218 P21554 Cannabinoid CB1 receptor 86.80% 96.61%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 86.58% 94.23%
CHEMBL2581 P07339 Cathepsin D 86.18% 98.95%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 86.18% 95.50%
CHEMBL1951 P21397 Monoamine oxidase A 85.97% 91.49%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 85.88% 94.08%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.82% 94.45%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 85.82% 91.71%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.68% 95.89%
CHEMBL5255 O00206 Toll-like receptor 4 85.48% 92.50%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 85.00% 86.92%
CHEMBL1914 P06276 Butyrylcholinesterase 84.22% 95.00%
CHEMBL3359 P21462 Formyl peptide receptor 1 84.14% 93.56%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 83.50% 97.50%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 82.75% 94.62%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 82.48% 89.05%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 81.59% 96.95%
CHEMBL2095226 P05556 Integrin alpha-5/beta-1 80.05% 96.39%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dracaena surculosa
Paris mairei
Paris polyphylla var. chinensis
Polygonatum kingianum
Trillium erectum
Triteleia hyacinthina

Cross-Links

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PubChem 14776074
LOTUS LTS0142865
wikiData Q105306056