[(6R)-6-[(8S,9R,13R,14R,16R,17R)-3,16-dihydroxy-4,9,13,14-tetramethyl-11-oxo-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxy-7,8,12,15,16,17-hexahydro-6H-cyclopenta[a]phenanthren-17-yl]-6-hydroxy-2-methyl-5-oxoheptan-2-yl] acetate

Details

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Internal ID bf9ef34a-ce8c-4334-bb0d-2033dca00344
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name [(6R)-6-[(8S,9R,13R,14R,16R,17R)-3,16-dihydroxy-4,9,13,14-tetramethyl-11-oxo-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxy-7,8,12,15,16,17-hexahydro-6H-cyclopenta[a]phenanthren-17-yl]-6-hydroxy-2-methyl-5-oxoheptan-2-yl] acetate
SMILES (Canonical) CC1=C2CCC3C4(CC(C(C4(CC(=O)C3(C2=CC(=C1O)OC5C(C(C(C(O5)COC6C(C(C(C(O6)CO)O)O)O)O)O)O)C)C)C(C)(C(=O)CCC(C)(C)OC(=O)C)O)O)C
SMILES (Isomeric) CC1=C2CC[C@H]3[C@]4(C[C@H]([C@@H]([C@]4(CC(=O)[C@]3(C2=CC(=C1O)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)O)O)O)C)C)[C@](C)(C(=O)CCC(C)(C)OC(=O)C)O)O)C
InChI InChI=1S/C43H64O18/c1-18-20-9-10-26-40(5)14-22(46)36(43(8,56)27(47)11-12-39(3,4)61-19(2)45)41(40,6)15-28(48)42(26,7)21(20)13-23(29(18)49)58-38-35(55)33(53)31(51)25(60-38)17-57-37-34(54)32(52)30(50)24(16-44)59-37/h13,22,24-26,30-38,44,46,49-56H,9-12,14-17H2,1-8H3/t22-,24-,25-,26+,30-,31-,32+,33+,34-,35-,36+,37-,38-,40-,41-,42+,43+/m1/s1
InChI Key VZFXZQQZJZPIGO-XRBXGOFKSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C43H64O18
Molecular Weight 869.00 g/mol
Exact Mass 868.40926519 g/mol
Topological Polar Surface Area (TPSA) 300.00 Ų
XlogP 0.00
Atomic LogP (AlogP) -0.67
H-Bond Acceptor 18
H-Bond Donor 10
Rotatable Bonds 12

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(6R)-6-[(8S,9R,13R,14R,16R,17R)-3,16-dihydroxy-4,9,13,14-tetramethyl-11-oxo-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxy-7,8,12,15,16,17-hexahydro-6H-cyclopenta[a]phenanthren-17-yl]-6-hydroxy-2-methyl-5-oxoheptan-2-yl] acetate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7531 75.31%
Caco-2 - 0.8719 87.19%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.7634 76.34%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8271 82.71%
OATP1B3 inhibitior + 0.8562 85.62%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.6500 65.00%
BSEP inhibitior + 0.9149 91.49%
P-glycoprotein inhibitior + 0.7512 75.12%
P-glycoprotein substrate + 0.6286 62.86%
CYP3A4 substrate + 0.7316 73.16%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8697 86.97%
CYP3A4 inhibition - 0.8125 81.25%
CYP2C9 inhibition - 0.8728 87.28%
CYP2C19 inhibition - 0.8689 86.89%
CYP2D6 inhibition - 0.9508 95.08%
CYP1A2 inhibition - 0.7844 78.44%
CYP2C8 inhibition + 0.7786 77.86%
CYP inhibitory promiscuity - 0.9642 96.42%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.6689 66.89%
Eye corrosion - 0.9922 99.22%
Eye irritation - 0.9054 90.54%
Skin irritation - 0.7429 74.29%
Skin corrosion - 0.9509 95.09%
Ames mutagenesis - 0.6900 69.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6705 67.05%
Micronuclear - 0.8100 81.00%
Hepatotoxicity - 0.6375 63.75%
skin sensitisation - 0.9349 93.49%
Respiratory toxicity + 0.6444 64.44%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.5500 55.00%
Nephrotoxicity - 0.6156 61.56%
Acute Oral Toxicity (c) III 0.3964 39.64%
Estrogen receptor binding + 0.8210 82.10%
Androgen receptor binding + 0.7407 74.07%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding + 0.7738 77.38%
Aromatase binding + 0.6844 68.44%
PPAR gamma + 0.8073 80.73%
Honey bee toxicity - 0.6913 69.13%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.9721 97.21%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.81% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.53% 85.14%
CHEMBL2581 P07339 Cathepsin D 96.49% 98.95%
CHEMBL241 Q14432 Phosphodiesterase 3A 96.38% 92.94%
CHEMBL220 P22303 Acetylcholinesterase 96.09% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.07% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.52% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.50% 89.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.19% 94.45%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.52% 97.25%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.04% 86.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 90.46% 94.00%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 89.81% 82.38%
CHEMBL2996 Q05655 Protein kinase C delta 89.72% 97.79%
CHEMBL5255 O00206 Toll-like receptor 4 89.68% 92.50%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.66% 100.00%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 89.55% 85.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.85% 95.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.42% 99.17%
CHEMBL2095226 P05556 Integrin alpha-5/beta-1 87.40% 96.39%
CHEMBL4581 P52732 Kinesin-like protein 1 87.07% 93.18%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.04% 95.89%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 85.71% 96.21%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 85.39% 89.05%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 84.41% 95.89%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 84.22% 93.04%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.29% 99.23%
CHEMBL4208 P20618 Proteasome component C5 83.29% 90.00%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.52% 100.00%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 81.82% 95.78%
CHEMBL3401 O75469 Pregnane X receptor 81.73% 94.73%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 81.01% 95.64%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 80.79% 96.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Cyclanthera pedata

Cross-Links

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PubChem 163040733
LOTUS LTS0180629
wikiData Q105299757