[(3S,4R,5R,6S)-4-hydroxy-6-[(1S,2S,4S,5'S,6R,7S,8R,9S,12S,13R,14R,16R)-16-hydroxy-5',7,9,13-tetramethyl-20-oxospiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-14-yl]oxy-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl] hydrogen sulfate

Details

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Internal ID 09979c21-ffbe-42d2-a179-8267d19f00e3
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name [(3S,4R,5R,6S)-4-hydroxy-6-[(1S,2S,4S,5'S,6R,7S,8R,9S,12S,13R,14R,16R)-16-hydroxy-5',7,9,13-tetramethyl-20-oxospiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-14-yl]oxy-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl] hydrogen sulfate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C38H58O16S/c1-16-6-9-38(49-14-16)17(2)28-24(53-38)13-22-27-21(7-8-36(22,28)4)37(5)19(11-23(27)40)10-20(39)12-26(37)51-35-33(30(42)25(15-48-35)54-55(45,46)47)52-34-32(44)31(43)29(41)18(3)50-34/h11,16-18,20-22,24-35,39,41-44H,6-10,12-15H2,1-5H3,(H,45,46,47)/t16-,17-,18-,20+,21-,22-,24-,25-,26+,27+,28-,29-,30-,31+,32+,33+,34-,35-,36-,37-,38+/m0/s1
InChI Key VVCXRPHNKJANFX-HTZGTXGESA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C38H58O16S
Molecular Weight 802.90 g/mol
Exact Mass 802.34455693 g/mol
Topological Polar Surface Area (TPSA) 246.00 Ų
XlogP 0.60
Atomic LogP (AlogP) 1.01
H-Bond Acceptor 15
H-Bond Donor 6
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(3S,4R,5R,6S)-4-hydroxy-6-[(1S,2S,4S,5'S,6R,7S,8R,9S,12S,13R,14R,16R)-16-hydroxy-5',7,9,13-tetramethyl-20-oxospiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-14-yl]oxy-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl] hydrogen sulfate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8765 87.65%
Caco-2 - 0.8821 88.21%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.5609 56.09%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8280 82.80%
OATP1B3 inhibitior + 0.9308 93.08%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8271 82.71%
BSEP inhibitior + 0.9328 93.28%
P-glycoprotein inhibitior + 0.7458 74.58%
P-glycoprotein substrate + 0.6694 66.94%
CYP3A4 substrate + 0.7584 75.84%
CYP2C9 substrate - 0.7915 79.15%
CYP2D6 substrate - 0.8721 87.21%
CYP3A4 inhibition - 0.8755 87.55%
CYP2C9 inhibition - 0.7768 77.68%
CYP2C19 inhibition - 0.7381 73.81%
CYP2D6 inhibition - 0.8715 87.15%
CYP1A2 inhibition - 0.7583 75.83%
CYP2C8 inhibition + 0.7258 72.58%
CYP inhibitory promiscuity - 0.9267 92.67%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.5800 58.00%
Carcinogenicity (trinary) Non-required 0.5140 51.40%
Eye corrosion - 0.9785 97.85%
Eye irritation - 0.9156 91.56%
Skin irritation - 0.7362 73.62%
Skin corrosion - 0.9069 90.69%
Ames mutagenesis - 0.7100 71.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6870 68.70%
Micronuclear + 0.5500 55.00%
Hepatotoxicity - 0.6217 62.17%
skin sensitisation - 0.8424 84.24%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity - 0.6720 67.20%
Acute Oral Toxicity (c) III 0.5599 55.99%
Estrogen receptor binding + 0.8402 84.02%
Androgen receptor binding + 0.7547 75.47%
Thyroid receptor binding - 0.5691 56.91%
Glucocorticoid receptor binding + 0.6540 65.40%
Aromatase binding + 0.6816 68.16%
PPAR gamma + 0.7407 74.07%
Honey bee toxicity - 0.5475 54.75%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5600 56.00%
Fish aquatic toxicity + 0.9923 99.23%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL226 P30542 Adenosine A1 receptor 98.63% 95.93%
CHEMBL332 P03956 Matrix metalloproteinase-1 95.59% 94.50%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.24% 96.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 94.47% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.15% 89.00%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.15% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.07% 97.09%
CHEMBL241 Q14432 Phosphodiesterase 3A 90.53% 92.94%
CHEMBL2581 P07339 Cathepsin D 89.98% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.88% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.15% 86.33%
CHEMBL255 P29275 Adenosine A2b receptor 87.65% 98.59%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.49% 95.89%
CHEMBL5255 O00206 Toll-like receptor 4 86.86% 92.50%
CHEMBL3922 P50579 Methionine aminopeptidase 2 85.82% 97.28%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 85.82% 96.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.63% 94.00%
CHEMBL1871 P10275 Androgen Receptor 83.90% 96.43%
CHEMBL221 P23219 Cyclooxygenase-1 83.56% 90.17%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 83.12% 93.04%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.90% 95.89%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.71% 100.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.97% 94.45%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 81.87% 96.90%
CHEMBL340 P08684 Cytochrome P450 3A4 81.81% 91.19%
CHEMBL5028 O14672 ADAM10 81.76% 97.50%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.60% 99.23%
CHEMBL259 P32245 Melanocortin receptor 4 81.28% 95.38%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.63% 97.14%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 80.51% 92.78%
CHEMBL4588 P22894 Matrix metalloproteinase 8 80.15% 94.66%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dracaena angustifolia

Cross-Links

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PubChem 46939149
LOTUS LTS0015553
wikiData Q105297595