(1S,4aS,5R,7S,7aS)-5,7-dihydroxy-7-methyl-1-[(2S,3S,4R,5S,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4a,5,6,7a-tetrahydro-1H-cyclopenta[c]pyran-4-carboxylic acid

Details

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Internal ID 93bf1039-2d40-4a0d-b580-1c11f5b79a9d
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name (1S,4aS,5R,7S,7aS)-5,7-dihydroxy-7-methyl-1-[(2S,3S,4R,5S,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4a,5,6,7a-tetrahydro-1H-cyclopenta[c]pyran-4-carboxylic acid
SMILES (Canonical) CC1(CC(C2C1C(OC=C2C(=O)O)OC3C(C(C(C(O3)CO)O)O)O)O)O
SMILES (Isomeric) C[C@@]1(C[C@H]([C@H]2[C@@H]1[C@@H](OC=C2C(=O)O)O[C@H]3[C@H]([C@@H]([C@@H]([C@@H](O3)CO)O)O)O)O)O
InChI InChI=1S/C16H24O11/c1-16(24)2-6(18)8-5(13(22)23)4-25-14(9(8)16)27-15-12(21)11(20)10(19)7(3-17)26-15/h4,6-12,14-15,17-21,24H,2-3H2,1H3,(H,22,23)/t6-,7+,8+,9-,10-,11-,12+,14+,15+,16+/m1/s1
InChI Key YSIFYNVXJOGADM-LEJYUZFGSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C16H24O11
Molecular Weight 392.35 g/mol
Exact Mass 392.13186158 g/mol
Topological Polar Surface Area (TPSA) 186.00 Ų
XlogP -2.90
Atomic LogP (AlogP) -3.12
H-Bond Acceptor 10
H-Bond Donor 7
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1S,4aS,5R,7S,7aS)-5,7-dihydroxy-7-methyl-1-[(2S,3S,4R,5S,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4a,5,6,7a-tetrahydro-1H-cyclopenta[c]pyran-4-carboxylic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7115 71.15%
Caco-2 - 0.8975 89.75%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.8429 84.29%
Subcellular localzation Mitochondria 0.6595 65.95%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7471 74.71%
OATP1B3 inhibitior + 0.9476 94.76%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.9403 94.03%
P-glycoprotein inhibitior - 0.8844 88.44%
P-glycoprotein substrate - 0.8589 85.89%
CYP3A4 substrate + 0.5797 57.97%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8863 88.63%
CYP3A4 inhibition - 0.9377 93.77%
CYP2C9 inhibition - 0.9055 90.55%
CYP2C19 inhibition - 0.8851 88.51%
CYP2D6 inhibition - 0.9118 91.18%
CYP1A2 inhibition - 0.8960 89.60%
CYP2C8 inhibition - 0.8290 82.90%
CYP inhibitory promiscuity - 0.8494 84.94%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6294 62.94%
Eye corrosion - 0.9903 99.03%
Eye irritation - 0.9670 96.70%
Skin irritation - 0.7163 71.63%
Skin corrosion - 0.9443 94.43%
Ames mutagenesis - 0.5700 57.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6696 66.96%
Micronuclear - 0.7200 72.00%
Hepatotoxicity - 0.8339 83.39%
skin sensitisation - 0.8626 86.26%
Respiratory toxicity + 0.6444 64.44%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.6000 60.00%
Nephrotoxicity + 0.5597 55.97%
Acute Oral Toxicity (c) III 0.4392 43.92%
Estrogen receptor binding + 0.6131 61.31%
Androgen receptor binding - 0.5446 54.46%
Thyroid receptor binding + 0.5167 51.67%
Glucocorticoid receptor binding - 0.5431 54.31%
Aromatase binding + 0.6140 61.40%
PPAR gamma + 0.5170 51.70%
Honey bee toxicity - 0.8339 83.39%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.7200 72.00%
Fish aquatic toxicity + 0.6574 65.74%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.89% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.01% 91.11%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.45% 86.33%
CHEMBL4208 P20618 Proteasome component C5 88.76% 90.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.71% 97.09%
CHEMBL220 P22303 Acetylcholinesterase 86.40% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.01% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.31% 89.00%
CHEMBL2581 P07339 Cathepsin D 82.62% 98.95%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.20% 95.89%
CHEMBL5255 O00206 Toll-like receptor 4 80.98% 92.50%
CHEMBL221 P23219 Cyclooxygenase-1 80.56% 90.17%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.35% 96.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Genipa americana

Cross-Links

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PubChem 162985513
LOTUS LTS0000289
wikiData Q105359651