(2S,3S,4S,5S,6R)-2-[(2R,3R,4S,5R,6R)-4-hydroxy-2-(hydroxymethyl)-6-[(1R,2S,4S,5'R,6R,7S,8R,9S,12S,13S,16S,18S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-piperidine]-16-yl]oxy-5-[(2S,3S,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

Details

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Internal ID 67d39967-e577-4eb0-80f4-25f7558b4f58
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,3S,4S,5S,6R)-2-[(2R,3R,4S,5R,6R)-4-hydroxy-2-(hydroxymethyl)-6-[(1R,2S,4S,5'R,6R,7S,8R,9S,12S,13S,16S,18S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-piperidine]-16-yl]oxy-5-[(2S,3S,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CCC6C5(CCC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)C)O)O)O)O)OC9C(C(C(C(O9)C)O)O)O)C)C)C)NC1
SMILES (Isomeric) C[C@@H]1CC[C@@]2([C@H]([C@H]3[C@@H](O2)C[C@@H]4[C@@]3(CC[C@H]5[C@H]4CC[C@@H]6[C@@]5(CC[C@@H](C6)O[C@H]7[C@@H]([C@H]([C@H]([C@H](O7)CO)O[C@H]8[C@H]([C@H]([C@@H]([C@H](O8)C)O)O)O)O)O[C@H]9[C@H]([C@H]([C@@H]([C@H](O9)C)O)O)O)C)C)C)NC1
InChI InChI=1S/C45H75NO15/c1-19-9-14-45(46-17-19)20(2)30-28(61-45)16-27-25-8-7-23-15-24(10-12-43(23,5)26(25)11-13-44(27,30)6)57-42-39(60-41-36(53)34(51)32(49)22(4)56-41)37(54)38(29(18-47)58-42)59-40-35(52)33(50)31(48)21(3)55-40/h19-42,46-54H,7-18H2,1-6H3/t19-,20+,21-,22-,23+,24+,25-,26+,27+,28+,29-,30+,31-,32-,33+,34+,35+,36+,37+,38+,39-,40+,41+,42-,43+,44+,45-/m1/s1
InChI Key BIUGDAPKHAWFIT-QUMYWMABSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C45H75NO15
Molecular Weight 870.10 g/mol
Exact Mass 869.51367069 g/mol
Topological Polar Surface Area (TPSA) 239.00 Ų
XlogP 1.90
Atomic LogP (AlogP) 0.89
H-Bond Acceptor 16
H-Bond Donor 9
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3S,4S,5S,6R)-2-[(2R,3R,4S,5R,6R)-4-hydroxy-2-(hydroxymethyl)-6-[(1R,2S,4S,5'R,6R,7S,8R,9S,12S,13S,16S,18S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-piperidine]-16-yl]oxy-5-[(2S,3S,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5898 58.98%
Caco-2 - 0.8827 88.27%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.4445 44.45%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9205 92.05%
OATP1B3 inhibitior + 0.9498 94.98%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior + 0.5886 58.86%
P-glycoprotein inhibitior + 0.7267 72.67%
P-glycoprotein substrate - 0.5889 58.89%
CYP3A4 substrate + 0.7399 73.99%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8164 81.64%
CYP3A4 inhibition - 0.9579 95.79%
CYP2C9 inhibition - 0.9328 93.28%
CYP2C19 inhibition - 0.9122 91.22%
CYP2D6 inhibition - 0.9255 92.55%
CYP1A2 inhibition - 0.9356 93.56%
CYP2C8 inhibition + 0.6154 61.54%
CYP inhibitory promiscuity - 0.8908 89.08%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5924 59.24%
Eye corrosion - 0.9887 98.87%
Eye irritation - 0.9107 91.07%
Skin irritation - 0.7295 72.95%
Skin corrosion - 0.9289 92.89%
Ames mutagenesis - 0.7732 77.32%
Human Ether-a-go-go-Related Gene inhibition + 0.7920 79.20%
Micronuclear + 0.5600 56.00%
Hepatotoxicity - 0.9125 91.25%
skin sensitisation - 0.8782 87.82%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity - 0.8256 82.56%
Acute Oral Toxicity (c) III 0.5270 52.70%
Estrogen receptor binding + 0.8176 81.76%
Androgen receptor binding - 0.4824 48.24%
Thyroid receptor binding - 0.5669 56.69%
Glucocorticoid receptor binding + 0.5692 56.92%
Aromatase binding + 0.7027 70.27%
PPAR gamma + 0.7197 71.97%
Honey bee toxicity - 0.5781 57.81%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity - 0.5848 58.48%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.57% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 97.63% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.57% 91.11%
CHEMBL233 P35372 Mu opioid receptor 94.02% 97.93%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 93.62% 89.05%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 93.50% 97.31%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 92.85% 95.58%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.72% 97.25%
CHEMBL218 P21554 Cannabinoid CB1 receptor 91.79% 96.61%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 91.44% 96.21%
CHEMBL237 P41145 Kappa opioid receptor 90.80% 98.10%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.62% 94.45%
CHEMBL241 Q14432 Phosphodiesterase 3A 89.62% 92.94%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.97% 100.00%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 87.79% 97.50%
CHEMBL226 P30542 Adenosine A1 receptor 86.93% 95.93%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.76% 95.89%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 86.57% 96.67%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 86.07% 95.50%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 85.91% 97.86%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 85.42% 95.36%
CHEMBL2996 Q05655 Protein kinase C delta 85.32% 97.79%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 85.20% 92.86%
CHEMBL204 P00734 Thrombin 85.09% 96.01%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 84.46% 95.89%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.37% 94.00%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 83.82% 96.38%
CHEMBL4581 P52732 Kinesin-like protein 1 83.30% 93.18%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.96% 100.00%
CHEMBL2094135 Q96BI3 Gamma-secretase 82.77% 98.05%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.90% 89.00%
CHEMBL1907601 P11802 Cyclin-dependent kinase 4/cyclin D1 80.68% 98.99%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Solanum dulcamara

Cross-Links

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PubChem 163008515
LOTUS LTS0035171
wikiData Q104936790