9-[(3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-3H-purin-2-one

Details

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Internal ID 8cf9b3a0-1384-4b7e-b7f2-dc72c58c729b
Taxonomy Nucleosides, nucleotides, and analogues > Purine nucleosides
IUPAC Name 9-[(3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-3H-purin-2-one
SMILES (Canonical) C1=NC(=O)NC2=C1N=CN2C3C(C(C(O3)CO)O)O
SMILES (Isomeric) C1=NC(=O)NC2=C1N=CN2C3[C@@H]([C@@H]([C@H](O3)CO)O)O
InChI InChI=1S/C10H12N4O5/c15-2-5-6(16)7(17)9(19-5)14-3-12-4-1-11-10(18)13-8(4)14/h1,3,5-7,9,15-17H,2H2,(H,11,13,18)/t5-,6-,7-,9?/m1/s1
InChI Key PFUVWXNGEZZGDC-PILSHRGASA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C10H12N4O5
Molecular Weight 268.23 g/mol
Exact Mass 268.08076950 g/mol
Topological Polar Surface Area (TPSA) 129.00 Ų
XlogP -2.10
Atomic LogP (AlogP) -2.27
H-Bond Acceptor 8
H-Bond Donor 4
Rotatable Bonds 2

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 9-[(3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-3H-purin-2-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7802 78.02%
Caco-2 - 0.9361 93.61%
Blood Brain Barrier + 0.6750 67.50%
Human oral bioavailability - 0.8571 85.71%
Subcellular localzation Nucleus 0.4443 44.43%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9181 91.81%
OATP1B3 inhibitior + 0.9507 95.07%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 1.0000 100.00%
BSEP inhibitior - 0.8922 89.22%
P-glycoprotein inhibitior - 0.9355 93.55%
P-glycoprotein substrate - 0.9004 90.04%
CYP3A4 substrate - 0.5503 55.03%
CYP2C9 substrate - 0.8000 80.00%
CYP2D6 substrate - 0.8493 84.93%
CYP3A4 inhibition - 0.9819 98.19%
CYP2C9 inhibition - 0.9718 97.18%
CYP2C19 inhibition - 0.9587 95.87%
CYP2D6 inhibition - 0.9599 95.99%
CYP1A2 inhibition - 0.7863 78.63%
CYP2C8 inhibition - 0.8725 87.25%
CYP inhibitory promiscuity - 0.9806 98.06%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6645 66.45%
Eye corrosion - 0.9898 98.98%
Eye irritation - 0.9346 93.46%
Skin irritation - 0.7606 76.06%
Skin corrosion - 0.9430 94.30%
Ames mutagenesis - 0.6416 64.16%
Human Ether-a-go-go-Related Gene inhibition - 0.6160 61.60%
Micronuclear + 0.9800 98.00%
Hepatotoxicity + 0.5582 55.82%
skin sensitisation - 0.8665 86.65%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity - 0.8160 81.60%
Acute Oral Toxicity (c) III 0.4966 49.66%
Estrogen receptor binding - 0.6042 60.42%
Androgen receptor binding + 0.6022 60.22%
Thyroid receptor binding - 0.5361 53.61%
Glucocorticoid receptor binding + 0.5751 57.51%
Aromatase binding + 0.7376 73.76%
PPAR gamma + 0.6414 64.14%
Honey bee toxicity - 0.9014 90.14%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.7200 72.00%
Fish aquatic toxicity - 0.8219 82.19%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.28% 96.09%
CHEMBL3401 O75469 Pregnane X receptor 92.43% 94.73%
CHEMBL226 P30542 Adenosine A1 receptor 92.25% 95.93%
CHEMBL5103 Q969S8 Histone deacetylase 10 89.05% 90.08%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 88.97% 94.00%
CHEMBL2424504 P29375 Lysine-specific demethylase 5A 87.61% 99.23%
CHEMBL2581 P07339 Cathepsin D 86.39% 98.95%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 86.38% 98.46%
CHEMBL3310 Q96DB2 Histone deacetylase 11 85.99% 88.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.88% 89.00%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 84.22% 89.67%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 84.05% 85.14%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 83.64% 93.10%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.58% 99.17%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.45% 99.23%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.47% 94.45%
CHEMBL3714130 P46095 G-protein coupled receptor 6 82.39% 97.36%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 82.33% 86.92%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.15% 95.56%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 81.69% 80.33%
CHEMBL1781 P11387 DNA topoisomerase I 81.06% 97.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.39% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Strobilanthes cusia

Cross-Links

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PubChem 11357654
NPASS NPC110907