[(3R,4R,4aR,5S,6R,6aR,6aS,6bR,8aR,10S,12aR,14bS)-4-acetyloxy-5,6-dihydroxy-10-[(2R,3R,4S,5S,6R)-4-hydroxy-3,5-bis[[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy]-6-[[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxan-2-yl]oxy-4a-(hydroxymethyl)-2,2,6a,6b,9,9,12a-heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicen-3-yl] 2-methylpropanoate

Details

Top
Internal ID a2621117-e6ce-434f-aaa3-3f3c6b7a1945
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name [(3R,4R,4aR,5S,6R,6aR,6aS,6bR,8aR,10S,12aR,14bS)-4-acetyloxy-5,6-dihydroxy-10-[(2R,3R,4S,5S,6R)-4-hydroxy-3,5-bis[[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy]-6-[[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxan-2-yl]oxy-4a-(hydroxymethyl)-2,2,6a,6b,9,9,12a-heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicen-3-yl] 2-methylpropanoate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C59H96O27/c1-23(2)49(76)86-47-48(79-24(3)63)59(22-62)26(17-54(47,4)5)25-11-12-32-56(8)15-14-33(55(6,7)31(56)13-16-57(32,9)58(25,10)45(74)46(59)75)83-53-44(85-52-41(72)38(69)36(67)29(19-61)81-52)42(73)43(84-51-40(71)37(68)35(66)28(18-60)80-51)30(82-53)21-78-50-39(70)34(65)27(64)20-77-50/h11,23,26-48,50-53,60-62,64-75H,12-22H2,1-10H3/t26-,27-,28+,29+,30+,31-,32+,33-,34-,35+,36+,37-,38-,39+,40+,41+,42-,43+,44+,45-,46+,47-,48-,50-,51-,52-,53-,56-,57+,58-,59-/m0/s1
InChI Key XRVVDCNBQPJWQV-PAWMKAGNSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C59H96O27
Molecular Weight 1237.40 g/mol
Exact Mass 1236.61389778 g/mol
Topological Polar Surface Area (TPSA) 430.00 Ų
XlogP -1.00
Atomic LogP (AlogP) -3.26
H-Bond Acceptor 27
H-Bond Donor 15
Rotatable Bonds 15

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of [(3R,4R,4aR,5S,6R,6aR,6aS,6bR,8aR,10S,12aR,14bS)-4-acetyloxy-5,6-dihydroxy-10-[(2R,3R,4S,5S,6R)-4-hydroxy-3,5-bis[[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy]-6-[[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxan-2-yl]oxy-4a-(hydroxymethyl)-2,2,6a,6b,9,9,12a-heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicen-3-yl] 2-methylpropanoate

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7601 76.01%
Caco-2 - 0.8713 87.13%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Mitochondria 0.8703 87.03%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7828 78.28%
OATP1B3 inhibitior - 0.4610 46.10%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.5026 50.26%
BSEP inhibitior + 0.9511 95.11%
P-glycoprotein inhibitior + 0.7468 74.68%
P-glycoprotein substrate + 0.5916 59.16%
CYP3A4 substrate + 0.7481 74.81%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8827 88.27%
CYP3A4 inhibition - 0.8310 83.10%
CYP2C9 inhibition - 0.8704 87.04%
CYP2C19 inhibition - 0.9216 92.16%
CYP2D6 inhibition - 0.9491 94.91%
CYP1A2 inhibition - 0.9009 90.09%
CYP2C8 inhibition + 0.7465 74.65%
CYP inhibitory promiscuity - 0.9733 97.33%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6024 60.24%
Eye corrosion - 0.9896 98.96%
Eye irritation - 0.8985 89.85%
Skin irritation - 0.5876 58.76%
Skin corrosion - 0.9441 94.41%
Ames mutagenesis - 0.5800 58.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7747 77.47%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.7658 76.58%
skin sensitisation - 0.9013 90.13%
Respiratory toxicity - 0.6111 61.11%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity - 0.6250 62.50%
Nephrotoxicity - 0.7875 78.75%
Acute Oral Toxicity (c) III 0.8023 80.23%
Estrogen receptor binding + 0.7505 75.05%
Androgen receptor binding + 0.7581 75.81%
Thyroid receptor binding + 0.6104 61.04%
Glucocorticoid receptor binding + 0.7757 77.57%
Aromatase binding + 0.6459 64.59%
PPAR gamma + 0.8033 80.33%
Honey bee toxicity - 0.6371 63.71%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.9585 95.85%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.57% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.97% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.76% 94.45%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 96.65% 96.77%
CHEMBL253 P34972 Cannabinoid CB2 receptor 96.37% 97.25%
CHEMBL2581 P07339 Cathepsin D 94.66% 98.95%
CHEMBL218 P21554 Cannabinoid CB1 receptor 92.39% 96.61%
CHEMBL226 P30542 Adenosine A1 receptor 90.50% 95.93%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 90.17% 96.21%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 89.90% 92.62%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.82% 97.09%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 88.78% 94.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.99% 95.89%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 86.83% 95.50%
CHEMBL5028 O14672 ADAM10 85.84% 97.50%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.51% 95.56%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 84.95% 91.07%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 84.73% 95.71%
CHEMBL221 P23219 Cyclooxygenase-1 84.66% 90.17%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.67% 100.00%
CHEMBL4208 P20618 Proteasome component C5 83.20% 90.00%
CHEMBL2996 Q05655 Protein kinase C delta 82.95% 97.79%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 82.27% 97.29%
CHEMBL5255 O00206 Toll-like receptor 4 82.06% 92.50%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 82.01% 96.90%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 81.92% 97.14%
CHEMBL2782 P35610 Acyl coenzyme A:cholesterol acyltransferase 1 81.14% 91.65%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 80.81% 91.24%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.17% 86.33%
CHEMBL340 P08684 Cytochrome P450 3A4 80.13% 91.19%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.09% 89.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Hydrocotyle sibthorpioides

Cross-Links

Top
PubChem 21576240
LOTUS LTS0175936
wikiData Q105340837