(2S,5R)-5-methyl-2-[(2S)-1-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypropan-2-yl]cyclohexan-1-one

Details

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Internal ID bd7a04e5-ff79-403e-9b75-6685c92ab366
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name trans-(2S,5R)-5-methyl-2-[(2S)-1-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypropan-2-yl]cyclohexan-1-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C16H28O7/c1-8-3-4-10(11(18)5-8)9(2)7-22-16-15(21)14(20)13(19)12(6-17)23-16/h8-10,12-17,19-21H,3-7H2,1-2H3/t8-,9-,10+,12-,13-,14+,15-,16-/m1/s1
InChI Key XBIHCBIHVVDEMU-HWHWOGACSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C16H28O7
Molecular Weight 332.39 g/mol
Exact Mass 332.18350323 g/mol
Topological Polar Surface Area (TPSA) 116.00 Ų
XlogP -0.10
Atomic LogP (AlogP) -0.56
H-Bond Acceptor 7
H-Bond Donor 4
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,5R)-5-methyl-2-[(2S)-1-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypropan-2-yl]cyclohexan-1-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7941 79.41%
Caco-2 - 0.7946 79.46%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.8731 87.31%
OATP2B1 inhibitior - 0.8534 85.34%
OATP1B1 inhibitior + 0.8953 89.53%
OATP1B3 inhibitior + 0.9102 91.02%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior - 0.9008 90.08%
P-glycoprotein inhibitior - 0.9207 92.07%
P-glycoprotein substrate - 0.8197 81.97%
CYP3A4 substrate + 0.5416 54.16%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8648 86.48%
CYP3A4 inhibition - 0.8292 82.92%
CYP2C9 inhibition - 0.8690 86.90%
CYP2C19 inhibition - 0.8596 85.96%
CYP2D6 inhibition - 0.9252 92.52%
CYP1A2 inhibition - 0.8749 87.49%
CYP2C8 inhibition - 0.9412 94.12%
CYP inhibitory promiscuity - 0.9386 93.86%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7667 76.67%
Eye corrosion - 0.9914 99.14%
Eye irritation - 0.9604 96.04%
Skin irritation - 0.8351 83.51%
Skin corrosion - 0.9731 97.31%
Ames mutagenesis + 0.5162 51.62%
Human Ether-a-go-go-Related Gene inhibition - 0.6698 66.98%
Micronuclear - 0.9200 92.00%
Hepatotoxicity - 0.6270 62.70%
skin sensitisation - 0.9256 92.56%
Respiratory toxicity - 0.5778 57.78%
Reproductive toxicity - 0.7333 73.33%
Mitochondrial toxicity - 0.6500 65.00%
Nephrotoxicity + 0.5952 59.52%
Acute Oral Toxicity (c) III 0.5411 54.11%
Estrogen receptor binding - 0.6351 63.51%
Androgen receptor binding - 0.4864 48.64%
Thyroid receptor binding - 0.5151 51.51%
Glucocorticoid receptor binding - 0.6070 60.70%
Aromatase binding - 0.5330 53.30%
PPAR gamma - 0.7085 70.85%
Honey bee toxicity - 0.8439 84.39%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.7100 71.00%
Fish aquatic toxicity + 0.8415 84.15%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 97.25% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.14% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.57% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 89.67% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.93% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.52% 95.89%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.68% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.27% 89.00%
CHEMBL5255 O00206 Toll-like receptor 4 81.76% 92.50%
CHEMBL226 P30542 Adenosine A1 receptor 81.36% 95.93%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 81.25% 96.21%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 80.64% 92.78%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ziziphora clinopodioides

Cross-Links

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PubChem 162889170
LOTUS LTS0221197
wikiData Q105324494