(3R,4S,5S,7R,9E,11R,12S)-12-[(1R)-1-hydroxyethyl]-4-[3-hydroxy-6-methyl-4-(methylamino)oxan-2-yl]oxy-3,5,7,11-tetramethyl-1-oxacyclododec-9-ene-2,8-dione

Details

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Internal ID 38aa1df5-90a4-4775-8deb-c12e47647d4c
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Aminosaccharides > Aminoglycosides
IUPAC Name (3R,4S,5S,7R,9E,11R,12S)-12-[(1R)-1-hydroxyethyl]-4-[3-hydroxy-6-methyl-4-(methylamino)oxan-2-yl]oxy-3,5,7,11-tetramethyl-1-oxacyclododec-9-ene-2,8-dione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C24H41NO7/c1-12-8-9-19(27)13(2)10-14(3)21(16(5)23(29)31-22(12)17(6)26)32-24-20(28)18(25-7)11-15(4)30-24/h8-9,12-18,20-22,24-26,28H,10-11H2,1-7H3/b9-8+/t12-,13-,14+,15?,16-,17-,18?,20?,21+,22+,24?/m1/s1
InChI Key VGSLNEQWOUFJQN-UTRXVPBYSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C24H41NO7
Molecular Weight 455.60 g/mol
Exact Mass 455.28830265 g/mol
Topological Polar Surface Area (TPSA) 114.00 Ų
XlogP 2.30
Atomic LogP (AlogP) 1.82
H-Bond Acceptor 8
H-Bond Donor 3
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (3R,4S,5S,7R,9E,11R,12S)-12-[(1R)-1-hydroxyethyl]-4-[3-hydroxy-6-methyl-4-(methylamino)oxan-2-yl]oxy-3,5,7,11-tetramethyl-1-oxacyclododec-9-ene-2,8-dione

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7154 71.54%
Caco-2 - 0.7555 75.55%
Blood Brain Barrier - 0.9000 90.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Nucleus 0.3645 36.45%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8892 88.92%
OATP1B3 inhibitior + 0.9405 94.05%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 1.0000 100.00%
BSEP inhibitior - 0.7595 75.95%
P-glycoprotein inhibitior - 0.5566 55.66%
P-glycoprotein substrate + 0.5436 54.36%
CYP3A4 substrate + 0.6469 64.69%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8673 86.73%
CYP3A4 inhibition - 0.8602 86.02%
CYP2C9 inhibition - 0.9544 95.44%
CYP2C19 inhibition - 0.9639 96.39%
CYP2D6 inhibition - 0.9325 93.25%
CYP1A2 inhibition - 0.9295 92.95%
CYP2C8 inhibition - 0.8273 82.73%
CYP inhibitory promiscuity - 0.9862 98.62%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.5642 56.42%
Eye corrosion - 0.9874 98.74%
Eye irritation - 0.9605 96.05%
Skin irritation - 0.7821 78.21%
Skin corrosion - 0.9352 93.52%
Ames mutagenesis - 0.6954 69.54%
Human Ether-a-go-go-Related Gene inhibition - 0.6215 62.15%
Micronuclear + 0.6000 60.00%
Hepatotoxicity + 0.6097 60.97%
skin sensitisation - 0.8913 89.13%
Respiratory toxicity + 0.6778 67.78%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity - 0.6063 60.63%
Acute Oral Toxicity (c) III 0.6191 61.91%
Estrogen receptor binding + 0.6459 64.59%
Androgen receptor binding - 0.5753 57.53%
Thyroid receptor binding + 0.5695 56.95%
Glucocorticoid receptor binding - 0.5339 53.39%
Aromatase binding - 0.5200 52.00%
PPAR gamma + 0.5315 53.15%
Honey bee toxicity - 0.6297 62.97%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity - 0.5864 58.64%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.90% 91.11%
CHEMBL2581 P07339 Cathepsin D 96.13% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 93.75% 85.14%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.48% 96.09%
CHEMBL4208 P20618 Proteasome component C5 89.89% 90.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.66% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.49% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.44% 89.00%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 87.61% 96.77%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 87.20% 95.58%
CHEMBL3401 O75469 Pregnane X receptor 84.76% 94.73%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 84.39% 90.71%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.88% 95.89%
CHEMBL4015 P41597 C-C chemokine receptor type 2 80.85% 98.57%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 80.85% 94.33%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 80.48% 91.07%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.37% 96.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.10% 97.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Eurycoma longifolia

Cross-Links

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PubChem 163020624
LOTUS LTS0010122
wikiData Q105223554