(2R,3R,4S,5S,6R)-2-[(2R)-4-[(1R,2S,4S,6S,7S,8R,9S,12S,13S,15R,16R,18S)-16-[(2R,3R,4R,5R,6R)-5-[(2S,3R,4S,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-6,15-dihydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-6-yl]-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID e43ff85f-e066-43ee-9de4-6a6d4ab80bc2
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2R,3R,4S,5S,6R)-2-[(2R)-4-[(1R,2S,4S,6S,7S,8R,9S,12S,13S,15R,16R,18S)-16-[(2R,3R,4R,5R,6R)-5-[(2S,3R,4S,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-6,15-dihydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-6-yl]-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC1C2C(CC3C2(CCC4C3CCC5C4(CC(C(C5)OC6C(C(C(C(O6)CO)OC7C(C(C(C(O7)CO)O)OC8C(C(C(CO8)O)O)O)O)O)O)O)C)C)OC1(CCC(C)COC9C(C(C(C(O9)CO)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@H]2[C@H](C[C@@H]3[C@@]2(CC[C@H]4[C@H]3CC[C@@H]5[C@@]4(C[C@H]([C@@H](C5)O[C@H]6[C@@H]([C@H]([C@H]([C@H](O6)CO)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O[C@H]8[C@@H]([C@H]([C@@H](CO8)O)O)O)O)O)O)O)C)C)O[C@]1(CC[C@@H](C)CO[C@H]9[C@@H]([C@H]([C@@H]([C@H](O9)CO)O)O)O)O
InChI InChI=1S/C50H84O24/c1-19(17-66-44-39(62)36(59)34(57)29(14-51)69-44)7-10-50(65)20(2)32-28(74-50)12-24-22-6-5-21-11-27(25(54)13-49(21,4)23(22)8-9-48(24,32)3)68-46-40(63)37(60)42(31(16-53)71-46)72-47-41(64)43(35(58)30(15-52)70-47)73-45-38(61)33(56)26(55)18-67-45/h19-47,51-65H,5-18H2,1-4H3/t19-,20+,21+,22-,23+,24+,25-,26-,27-,28+,29-,30-,31-,32+,33+,34-,35-,36+,37-,38-,39-,40-,41-,42+,43+,44-,45+,46-,47+,48+,49+,50+/m1/s1
InChI Key RSPUUUSROCUOIJ-ZBGDGXIFSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C50H84O24
Molecular Weight 1069.20 g/mol
Exact Mass 1068.53525354 g/mol
Topological Polar Surface Area (TPSA) 387.00 Ų
XlogP -2.30
Atomic LogP (AlogP) -4.35
H-Bond Acceptor 24
H-Bond Donor 15
Rotatable Bonds 15

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3R,4S,5S,6R)-2-[(2R)-4-[(1R,2S,4S,6S,7S,8R,9S,12S,13S,15R,16R,18S)-16-[(2R,3R,4R,5R,6R)-5-[(2S,3R,4S,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-6,15-dihydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-6-yl]-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5246 52.46%
Caco-2 - 0.8807 88.07%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.8429 84.29%
Subcellular localzation Mitochondria 0.6174 61.74%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8695 86.95%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior + 0.6250 62.50%
BSEP inhibitior + 0.8126 81.26%
P-glycoprotein inhibitior + 0.7424 74.24%
P-glycoprotein substrate + 0.6017 60.17%
CYP3A4 substrate + 0.7557 75.57%
CYP2C9 substrate - 0.8016 80.16%
CYP2D6 substrate - 0.8288 82.88%
CYP3A4 inhibition - 0.9473 94.73%
CYP2C9 inhibition - 0.9215 92.15%
CYP2C19 inhibition - 0.8997 89.97%
CYP2D6 inhibition - 0.9561 95.61%
CYP1A2 inhibition - 0.9215 92.15%
CYP2C8 inhibition + 0.6949 69.49%
CYP inhibitory promiscuity - 0.9616 96.16%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6223 62.23%
Eye corrosion - 0.9917 99.17%
Eye irritation - 0.9039 90.39%
Skin irritation - 0.6555 65.55%
Skin corrosion - 0.9521 95.21%
Ames mutagenesis - 0.7378 73.78%
Human Ether-a-go-go-Related Gene inhibition + 0.7716 77.16%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.8783 87.83%
skin sensitisation - 0.9420 94.20%
Respiratory toxicity + 0.6778 67.78%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.9561 95.61%
Acute Oral Toxicity (c) I 0.8185 81.85%
Estrogen receptor binding + 0.8484 84.84%
Androgen receptor binding + 0.6785 67.85%
Thyroid receptor binding - 0.5210 52.10%
Glucocorticoid receptor binding + 0.6288 62.88%
Aromatase binding + 0.6912 69.12%
PPAR gamma + 0.7740 77.40%
Honey bee toxicity - 0.5693 56.93%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6100 61.00%
Fish aquatic toxicity + 0.7523 75.23%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.30% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.30% 96.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 97.47% 96.61%
CHEMBL226 P30542 Adenosine A1 receptor 95.96% 95.93%
CHEMBL204 P00734 Thrombin 95.86% 96.01%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 95.80% 92.86%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.81% 97.09%
CHEMBL4302 P08183 P-glycoprotein 1 93.50% 92.98%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 93.29% 97.29%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 92.99% 96.21%
CHEMBL4581 P52732 Kinesin-like protein 1 92.63% 93.18%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.70% 100.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 91.47% 97.25%
CHEMBL233 P35372 Mu opioid receptor 90.99% 97.93%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.13% 94.45%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 89.91% 95.36%
CHEMBL221 P23219 Cyclooxygenase-1 89.44% 90.17%
CHEMBL237 P41145 Kappa opioid receptor 89.26% 98.10%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 89.10% 97.86%
CHEMBL2094135 Q96BI3 Gamma-secretase 88.22% 98.05%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 87.94% 92.78%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 87.47% 95.50%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 86.91% 95.58%
CHEMBL220 P22303 Acetylcholinesterase 86.87% 94.45%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.74% 95.89%
CHEMBL2360 P00492 Hypoxanthine-guanine phosphoribosyltransferase 85.97% 87.38%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 85.83% 91.03%
CHEMBL206 P03372 Estrogen receptor alpha 85.19% 97.64%
CHEMBL2996 Q05655 Protein kinase C delta 84.37% 97.79%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.26% 95.89%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 84.22% 96.77%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 84.15% 92.88%
CHEMBL3359 P21462 Formyl peptide receptor 1 83.84% 93.56%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 83.81% 89.05%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 83.78% 96.47%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 83.71% 95.17%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 83.59% 97.14%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 83.56% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.27% 86.33%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 83.10% 96.38%
CHEMBL5255 O00206 Toll-like receptor 4 82.55% 92.50%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 82.54% 100.00%
CHEMBL2095194 P08709 Coagulation factor VII/tissue factor 82.14% 99.17%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 81.49% 97.33%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 81.47% 92.32%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 81.42% 96.67%
CHEMBL1871 P10275 Androgen Receptor 81.26% 96.43%
CHEMBL2730 P21980 Protein-glutamine gamma-glutamyltransferase 80.39% 92.38%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Allium stipitatum

Cross-Links

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PubChem 162944979
LOTUS LTS0118907
wikiData Q105244814