(2R,3S,4R,5R,6S)-2-[(2S,3R,4R,5S,6S)-4-hydroxy-6-[(1R,2S,4S,5'R,6S,7S,8R,9R,12S,13R,15S,16S,18S)-15-hydroxy-5'-(hydroxymethyl)-7,9,13-trimethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-2-(hydroxymethyl)-5-[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

Details

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Internal ID 22d6f0bb-88ca-4d43-b4ab-95368444cc56
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2R,3S,4R,5R,6S)-2-[(2S,3R,4R,5S,6S)-4-hydroxy-6-[(1R,2S,4S,5'R,6S,7S,8R,9R,12S,13R,15S,16S,18S)-15-hydroxy-5'-(hydroxymethyl)-7,9,13-trimethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-2-(hydroxymethyl)-5-[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1C2C(CC3C2(CCC4C3CCC5C4(CC(C(C5)OC6C(C(C(C(O6)CO)OC7C(C(C(C(O7)C)O)O)O)O)OC8C(C(C(C(O8)C)O)O)O)O)C)C)OC19CCC(CO9)CO
SMILES (Isomeric) C[C@H]1[C@H]2[C@H](C[C@@H]3[C@]2(CC[C@H]4[C@H]3CC[C@@H]5[C@]4(C[C@@H]([C@H](C5)O[C@@H]6[C@H]([C@@H]([C@H]([C@@H](O6)CO)O[C@@H]7[C@H]([C@@H]([C@H]([C@@H](O7)C)O)O)O)O)O[C@@H]8[C@H]([C@@H]([C@H]([C@@H](O8)C)O)O)O)O)C)C)O[C@@]19CC[C@@H](CO9)CO
InChI InChI=1S/C45H74O18/c1-18-30-28(63-45(18)11-8-21(15-46)17-56-45)13-25-23-7-6-22-12-27(26(48)14-44(22,5)24(23)9-10-43(25,30)4)59-42-39(62-41-36(54)34(52)32(50)20(3)58-41)37(55)38(29(16-47)60-42)61-40-35(53)33(51)31(49)19(2)57-40/h18-42,46-55H,6-17H2,1-5H3/t18-,19-,20-,21+,22-,23+,24-,25-,26-,27-,28-,29-,30-,31-,32-,33+,34+,35-,36-,37+,38-,39-,40+,41+,42-,43+,44+,45-/m0/s1
InChI Key VFFZTNVCORWDDD-VMWMLAOOSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C45H74O18
Molecular Weight 903.10 g/mol
Exact Mass 902.48751551 g/mol
Topological Polar Surface Area (TPSA) 276.00 Ų
XlogP 0.00
Atomic LogP (AlogP) -0.74
H-Bond Acceptor 18
H-Bond Donor 10
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4R,5R,6S)-2-[(2S,3R,4R,5S,6S)-4-hydroxy-6-[(1R,2S,4S,5'R,6S,7S,8R,9R,12S,13R,15S,16S,18S)-15-hydroxy-5'-(hydroxymethyl)-7,9,13-trimethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-2-(hydroxymethyl)-5-[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5246 52.46%
Caco-2 - 0.8878 88.78%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.6174 61.74%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8787 87.87%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior + 0.6250 62.50%
BSEP inhibitior + 0.5593 55.93%
P-glycoprotein inhibitior + 0.7282 72.82%
P-glycoprotein substrate - 0.7182 71.82%
CYP3A4 substrate + 0.7510 75.10%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8164 81.64%
CYP3A4 inhibition - 0.9473 94.73%
CYP2C9 inhibition - 0.9215 92.15%
CYP2C19 inhibition - 0.8997 89.97%
CYP2D6 inhibition - 0.9561 95.61%
CYP1A2 inhibition - 0.9215 92.15%
CYP2C8 inhibition + 0.6975 69.75%
CYP inhibitory promiscuity - 0.9616 96.16%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6223 62.23%
Eye corrosion - 0.9917 99.17%
Eye irritation - 0.9120 91.20%
Skin irritation - 0.6555 65.55%
Skin corrosion - 0.9521 95.21%
Ames mutagenesis - 0.8000 80.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7937 79.37%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.8851 88.51%
skin sensitisation - 0.9420 94.20%
Respiratory toxicity + 0.8333 83.33%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.8906 89.06%
Acute Oral Toxicity (c) I 0.8185 81.85%
Estrogen receptor binding + 0.8174 81.74%
Androgen receptor binding + 0.7004 70.04%
Thyroid receptor binding - 0.5975 59.75%
Glucocorticoid receptor binding + 0.5552 55.52%
Aromatase binding + 0.6881 68.81%
PPAR gamma + 0.7319 73.19%
Honey bee toxicity - 0.5484 54.84%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.7523 75.23%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.99% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.59% 91.11%
CHEMBL218 P21554 Cannabinoid CB1 receptor 94.58% 96.61%
CHEMBL1951 P21397 Monoamine oxidase A 93.25% 91.49%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.22% 97.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 92.66% 100.00%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 90.87% 96.21%
CHEMBL226 P30542 Adenosine A1 receptor 89.64% 95.93%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 89.16% 95.89%
CHEMBL237 P41145 Kappa opioid receptor 89.02% 98.10%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 88.09% 95.50%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.50% 95.89%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 85.75% 95.58%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 85.62% 89.05%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 84.76% 95.83%
CHEMBL1914 P06276 Butyrylcholinesterase 84.66% 95.00%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 84.47% 97.86%
CHEMBL3714130 P46095 G-protein coupled receptor 6 84.28% 97.36%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.04% 86.33%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 81.56% 92.78%
CHEMBL220 P22303 Acetylcholinesterase 81.49% 94.45%
CHEMBL233 P35372 Mu opioid receptor 81.46% 97.93%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 81.43% 92.86%
CHEMBL204 P00734 Thrombin 81.43% 96.01%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.32% 89.00%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 81.09% 96.77%
CHEMBL253 P34972 Cannabinoid CB2 receptor 80.44% 97.25%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.33% 92.62%
CHEMBL2094135 Q96BI3 Gamma-secretase 80.15% 98.05%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Allium tuberosum

Cross-Links

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PubChem 163194580
LOTUS LTS0087149
wikiData Q105285272