(2R,3R,4R,5R,6S)-2-[(2R,3S,4S,5R,6R)-4-hydroxy-2-(hydroxymethyl)-6-[(1R,2S,4S,5'S,6R,7S,8S,9S,12S,13S,16S,18R)-8-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-5-[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

Details

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Internal ID 94086190-5957-4065-b9df-86552519dae1
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2R,3R,4R,5R,6S)-2-[(2R,3S,4S,5R,6R)-4-hydroxy-2-(hydroxymethyl)-6-[(1R,2S,4S,5'S,6R,7S,8S,9S,12S,13S,16S,18R)-8-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-5-[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3(C(O2)CC4C3(CCC5C4CCC6C5(CCC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)C)O)O)O)O)OC9C(C(C(C(O9)C)O)O)O)C)C)O)C)OC1
SMILES (Isomeric) C[C@H]1CC[C@@]2([C@H]([C@]3([C@@H](O2)C[C@@H]4[C@@]3(CC[C@H]5[C@H]4CC[C@H]6[C@@]5(CC[C@@H](C6)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O[C@@H]8[C@@H]([C@@H]([C@H]([C@@H](O8)C)O)O)O)O)O[C@@H]9[C@@H]([C@@H]([C@H]([C@@H](O9)C)O)O)O)C)C)O)C)OC1
InChI InChI=1S/C45H74O17/c1-19-9-14-44(55-18-19)22(4)45(54)29(62-44)16-27-25-8-7-23-15-24(10-12-42(23,5)26(25)11-13-43(27,45)6)58-41-38(61-40-35(52)33(50)31(48)21(3)57-40)36(53)37(28(17-46)59-41)60-39-34(51)32(49)30(47)20(2)56-39/h19-41,46-54H,7-18H2,1-6H3/t19-,20-,21-,22+,23+,24-,25+,26-,27-,28+,29-,30-,31-,32+,33+,34+,35+,36-,37+,38+,39+,40+,41+,42-,43-,44+,45+/m0/s1
InChI Key XJMYGGMHINYFDO-VYXBPMOHSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C45H74O17
Molecular Weight 887.10 g/mol
Exact Mass 886.49260089 g/mol
Topological Polar Surface Area (TPSA) 256.00 Ų
XlogP 0.90
Atomic LogP (AlogP) 0.44
H-Bond Acceptor 17
H-Bond Donor 9
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3R,4R,5R,6S)-2-[(2R,3S,4S,5R,6R)-4-hydroxy-2-(hydroxymethyl)-6-[(1R,2S,4S,5'S,6R,7S,8S,9S,12S,13S,16S,18R)-8-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-5-[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5917 59.17%
Caco-2 - 0.8885 88.85%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6898 68.98%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8561 85.61%
OATP1B3 inhibitior + 0.9448 94.48%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior + 0.5750 57.50%
BSEP inhibitior + 0.6910 69.10%
P-glycoprotein inhibitior + 0.7312 73.12%
P-glycoprotein substrate - 0.5139 51.39%
CYP3A4 substrate + 0.7474 74.74%
CYP2C9 substrate - 0.8018 80.18%
CYP2D6 substrate - 0.8301 83.01%
CYP3A4 inhibition - 0.9611 96.11%
CYP2C9 inhibition - 0.9091 90.91%
CYP2C19 inhibition - 0.8819 88.19%
CYP2D6 inhibition - 0.9566 95.66%
CYP1A2 inhibition - 0.9089 90.89%
CYP2C8 inhibition + 0.6656 66.56%
CYP inhibitory promiscuity - 0.9291 92.91%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6271 62.71%
Eye corrosion - 0.9909 99.09%
Eye irritation - 0.9113 91.13%
Skin irritation - 0.7119 71.19%
Skin corrosion - 0.9532 95.32%
Ames mutagenesis - 0.7354 73.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7652 76.52%
Micronuclear - 0.9200 92.00%
Hepatotoxicity - 0.8500 85.00%
skin sensitisation - 0.9466 94.66%
Respiratory toxicity + 0.8000 80.00%
Reproductive toxicity + 0.6222 62.22%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity - 0.8322 83.22%
Acute Oral Toxicity (c) I 0.7761 77.61%
Estrogen receptor binding + 0.8152 81.52%
Androgen receptor binding + 0.7496 74.96%
Thyroid receptor binding - 0.5735 57.35%
Glucocorticoid receptor binding + 0.5641 56.41%
Aromatase binding + 0.6736 67.36%
PPAR gamma + 0.7304 73.04%
Honey bee toxicity - 0.5371 53.71%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.8210 82.10%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.41% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.01% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.46% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.87% 97.25%
CHEMBL233 P35372 Mu opioid receptor 94.10% 97.93%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 93.88% 97.31%
CHEMBL226 P30542 Adenosine A1 receptor 93.18% 95.93%
CHEMBL218 P21554 Cannabinoid CB1 receptor 92.52% 96.61%
CHEMBL1994 P08235 Mineralocorticoid receptor 92.51% 100.00%
CHEMBL2243 O00519 Anandamide amidohydrolase 90.83% 97.53%
CHEMBL325 Q13547 Histone deacetylase 1 90.18% 95.92%
CHEMBL237 P41145 Kappa opioid receptor 90.13% 98.10%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 89.76% 89.05%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 88.68% 97.50%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 88.55% 91.71%
CHEMBL1951 P21397 Monoamine oxidase A 88.48% 91.49%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 88.46% 95.50%
CHEMBL1914 P06276 Butyrylcholinesterase 87.98% 95.00%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 87.61% 96.21%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 87.45% 95.58%
CHEMBL4302 P08183 P-glycoprotein 1 87.30% 92.98%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.97% 95.89%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 86.86% 97.86%
CHEMBL5255 O00206 Toll-like receptor 4 86.16% 92.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.94% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.80% 89.00%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 83.75% 95.36%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.99% 95.89%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 81.96% 92.86%
CHEMBL241 Q14432 Phosphodiesterase 3A 81.72% 92.94%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 81.58% 86.92%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.95% 92.62%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.78% 86.33%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 80.68% 96.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Asparagus officinalis

Cross-Links

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PubChem 163044386
LOTUS LTS0024052
wikiData Q105329056