9-(Hydroxymethyl)-10-[5-hydroxy-6-methyl-3,4-bis[[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy]oxan-2-yl]oxy-4,5,9,13,20,20-hexamethyl-24-oxahexacyclo[15.5.2.01,18.04,17.05,14.08,13]tetracos-15-en-2-one

Details

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Internal ID 55f4edd1-9527-4e15-af83-10c7bf950d0d
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name 9-(hydroxymethyl)-10-[5-hydroxy-6-methyl-3,4-bis[[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy]oxan-2-yl]oxy-4,5,9,13,20,20-hexamethyl-24-oxahexacyclo[15.5.2.01,18.04,17.05,14.08,13]tetracos-15-en-2-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C48H76O18/c1-22-30(53)37(65-39-35(58)33(56)31(54)23(18-49)62-39)38(66-40-36(59)34(57)32(55)24(19-50)63-40)41(61-22)64-29-10-11-43(4)25(44(29,5)20-51)8-12-45(6)26(43)9-13-48-27-16-42(2,3)14-15-47(27,21-60-48)28(52)17-46(45,48)7/h9,13,22-27,29-41,49-51,53-59H,8,10-12,14-21H2,1-7H3
InChI Key RWNLQRNNUHRXCZ-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C48H76O18
Molecular Weight 941.10 g/mol
Exact Mass 940.50316557 g/mol
Topological Polar Surface Area (TPSA) 284.00 Ų
XlogP 0.60
Atomic LogP (AlogP) -0.19
H-Bond Acceptor 18
H-Bond Donor 10
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 9-(Hydroxymethyl)-10-[5-hydroxy-6-methyl-3,4-bis[[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy]oxan-2-yl]oxy-4,5,9,13,20,20-hexamethyl-24-oxahexacyclo[15.5.2.01,18.04,17.05,14.08,13]tetracos-15-en-2-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6673 66.73%
Caco-2 - 0.8824 88.24%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.7947 79.47%
OATP2B1 inhibitior - 0.8790 87.90%
OATP1B1 inhibitior + 0.8266 82.66%
OATP1B3 inhibitior + 0.8750 87.50%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior + 0.7036 70.36%
P-glycoprotein inhibitior + 0.7520 75.20%
P-glycoprotein substrate - 0.5210 52.10%
CYP3A4 substrate + 0.7366 73.66%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8597 85.97%
CYP3A4 inhibition - 0.9480 94.80%
CYP2C9 inhibition - 0.8506 85.06%
CYP2C19 inhibition - 0.8515 85.15%
CYP2D6 inhibition - 0.9474 94.74%
CYP1A2 inhibition - 0.8997 89.97%
CYP2C8 inhibition + 0.6654 66.54%
CYP inhibitory promiscuity - 0.9275 92.75%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6390 63.90%
Eye corrosion - 0.9899 98.99%
Eye irritation - 0.9064 90.64%
Skin irritation - 0.6777 67.77%
Skin corrosion - 0.9441 94.41%
Ames mutagenesis - 0.6800 68.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7092 70.92%
Micronuclear - 0.9000 90.00%
Hepatotoxicity - 0.6012 60.12%
skin sensitisation - 0.9152 91.52%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity + 0.6778 67.78%
Mitochondrial toxicity - 0.5500 55.00%
Nephrotoxicity + 0.6501 65.01%
Acute Oral Toxicity (c) I 0.5045 50.45%
Estrogen receptor binding + 0.7847 78.47%
Androgen receptor binding + 0.7608 76.08%
Thyroid receptor binding - 0.5576 55.76%
Glucocorticoid receptor binding + 0.6749 67.49%
Aromatase binding + 0.6369 63.69%
PPAR gamma + 0.7565 75.65%
Honey bee toxicity - 0.6603 66.03%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity + 0.5600 56.00%
Fish aquatic toxicity + 0.9598 95.98%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.94% 91.11%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 94.42% 93.04%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.90% 86.33%
CHEMBL3714130 P46095 G-protein coupled receptor 6 93.57% 97.36%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.21% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.76% 97.09%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 90.16% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.61% 89.00%
CHEMBL2581 P07339 Cathepsin D 89.00% 98.95%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.55% 99.23%
CHEMBL1937 Q92769 Histone deacetylase 2 86.69% 94.75%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.84% 95.56%
CHEMBL226 P30542 Adenosine A1 receptor 85.39% 95.93%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.16% 100.00%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 84.29% 91.07%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 81.20% 82.69%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.03% 95.89%
CHEMBL220 P22303 Acetylcholinesterase 80.05% 94.45%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Clinopodium vulgare

Cross-Links

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PubChem 85246671
LOTUS LTS0189658
wikiData Q105246624