[(2R,3R,4R,5S,6S)-3,5-dihydroxy-2-[[(3S,8S,9S,10R,13S,14S,16S,17R)-17-[(2S,3S)-3-hydroxy-6-methylhept-5-en-2-yl]-10,13-dimethyl-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-16-yl]oxy]-6-methyloxan-4-yl] acetate

Details

Top
Internal ID e2b96b22-e393-4d97-9ffd-056902585b32
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name [(2R,3R,4R,5S,6S)-3,5-dihydroxy-2-[[(3S,8S,9S,10R,13S,14S,16S,17R)-17-[(2S,3S)-3-hydroxy-6-methylhept-5-en-2-yl]-10,13-dimethyl-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-16-yl]oxy]-6-methyloxan-4-yl] acetate
SMILES (Canonical) CC1C(C(C(C(O1)OC2CC3C4CC=C5CC(CCC5(C4CCC3(C2C(C)C(CC=C(C)C)O)C)C)OC6C(C(C(C(O6)CO)O)O)O)O)OC(=O)C)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@H]2C[C@H]3[C@@H]4CC=C5C[C@H](CC[C@@]5([C@H]4CC[C@@]3([C@H]2[C@H](C)[C@H](CC=C(C)C)O)C)C)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)O)OC(=O)C)O
InChI InChI=1S/C41H66O13/c1-19(2)8-11-28(44)20(3)31-29(53-39-36(49)37(51-22(5)43)32(45)21(4)50-39)17-27-25-10-9-23-16-24(12-14-40(23,6)26(25)13-15-41(27,31)7)52-38-35(48)34(47)33(46)30(18-42)54-38/h8-9,20-21,24-39,42,44-49H,10-18H2,1-7H3/t20-,21+,24+,25-,26+,27+,28+,29+,30-,31+,32+,33-,34+,35-,36-,37-,38-,39+,40+,41+/m1/s1
InChI Key BOPLCQZRUUPBAU-CYDJIVKNSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C41H66O13
Molecular Weight 767.00 g/mol
Exact Mass 766.45034216 g/mol
Topological Polar Surface Area (TPSA) 205.00 Ų
XlogP 3.50
Atomic LogP (AlogP) 2.50
H-Bond Acceptor 13
H-Bond Donor 7
Rotatable Bonds 10

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of [(2R,3R,4R,5S,6S)-3,5-dihydroxy-2-[[(3S,8S,9S,10R,13S,14S,16S,17R)-17-[(2S,3S)-3-hydroxy-6-methylhept-5-en-2-yl]-10,13-dimethyl-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-16-yl]oxy]-6-methyloxan-4-yl] acetate

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8800 88.00%
Caco-2 - 0.8794 87.94%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.8515 85.15%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8631 86.31%
OATP1B3 inhibitior - 0.3152 31.52%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.6526 65.26%
BSEP inhibitior + 0.7847 78.47%
P-glycoprotein inhibitior + 0.7498 74.98%
P-glycoprotein substrate + 0.5783 57.83%
CYP3A4 substrate + 0.7373 73.73%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8827 88.27%
CYP3A4 inhibition - 0.9072 90.72%
CYP2C9 inhibition - 0.8493 84.93%
CYP2C19 inhibition - 0.9348 93.48%
CYP2D6 inhibition - 0.9399 93.99%
CYP1A2 inhibition - 0.9005 90.05%
CYP2C8 inhibition + 0.6993 69.93%
CYP inhibitory promiscuity - 0.9315 93.15%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6163 61.63%
Eye corrosion - 0.9908 99.08%
Eye irritation - 0.9162 91.62%
Skin irritation + 0.5341 53.41%
Skin corrosion - 0.9434 94.34%
Ames mutagenesis - 0.8524 85.24%
Human Ether-a-go-go-Related Gene inhibition + 0.6940 69.40%
Micronuclear - 0.8400 84.00%
Hepatotoxicity - 0.7750 77.50%
skin sensitisation - 0.9069 90.69%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity - 0.9075 90.75%
Acute Oral Toxicity (c) III 0.6401 64.01%
Estrogen receptor binding + 0.7595 75.95%
Androgen receptor binding + 0.6782 67.82%
Thyroid receptor binding - 0.5666 56.66%
Glucocorticoid receptor binding + 0.6130 61.30%
Aromatase binding + 0.6222 62.22%
PPAR gamma + 0.7242 72.42%
Honey bee toxicity - 0.6607 66.07%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6800 68.00%
Fish aquatic toxicity + 0.9583 95.83%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.74% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.47% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.80% 94.45%
CHEMBL2581 P07339 Cathepsin D 95.67% 98.95%
CHEMBL226 P30542 Adenosine A1 receptor 94.37% 95.93%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 94.22% 95.89%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.17% 85.14%
CHEMBL1994 P08235 Mineralocorticoid receptor 93.11% 100.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.80% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.81% 97.09%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 90.78% 94.08%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.92% 89.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 89.37% 100.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 88.05% 91.24%
CHEMBL237 P41145 Kappa opioid receptor 87.83% 98.10%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 87.75% 89.05%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.64% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.36% 95.89%
CHEMBL3359 P21462 Formyl peptide receptor 1 85.77% 93.56%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 84.78% 91.07%
CHEMBL5028 O14672 ADAM10 83.30% 97.50%
CHEMBL3714130 P46095 G-protein coupled receptor 6 82.46% 97.36%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.35% 99.17%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 82.28% 89.67%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 82.16% 95.71%
CHEMBL340 P08684 Cytochrome P450 3A4 81.97% 91.19%
CHEMBL2413 P32246 C-C chemokine receptor type 1 81.87% 89.50%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 81.75% 95.56%
CHEMBL5255 O00206 Toll-like receptor 4 81.31% 92.50%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.98% 96.00%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 80.80% 100.00%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 80.25% 94.23%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ornithogalum candicans

Cross-Links

Top
PubChem 10974722
LOTUS LTS0017060
wikiData Q104939377