(2R,3R,4S,5S,6R)-2-[(2E,4R)-4-hydroxy-3,7-dimethylocta-2,6-dienoxy]-6-[[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxane-3,4,5-triol

Details

Top
Internal ID cd3d561a-2684-468b-9d9b-2e5c40f066d0
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2R,3R,4S,5S,6R)-2-[(2E,4R)-4-hydroxy-3,7-dimethylocta-2,6-dienoxy]-6-[[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxane-3,4,5-triol
SMILES (Canonical) CC(=CCC(C(=CCOC1C(C(C(C(O1)COC2C(C(C(CO2)O)O)O)O)O)O)C)O)C
SMILES (Isomeric) CC(=CC[C@H](/C(=C/CO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO[C@H]2[C@@H]([C@H]([C@H](CO2)O)O)O)O)O)O)/C)O)C
InChI InChI=1S/C21H36O11/c1-10(2)4-5-12(22)11(3)6-7-29-21-19(28)17(26)16(25)14(32-21)9-31-20-18(27)15(24)13(23)8-30-20/h4,6,12-28H,5,7-9H2,1-3H3/b11-6+/t12-,13+,14-,15+,16-,17+,18-,19-,20+,21-/m1/s1
InChI Key CEDKPURZFHSOJY-RATOJNDFSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C21H36O11
Molecular Weight 464.50 g/mol
Exact Mass 464.22576196 g/mol
Topological Polar Surface Area (TPSA) 179.00 Ų
XlogP -1.90
Atomic LogP (AlogP) -2.07
H-Bond Acceptor 11
H-Bond Donor 7
Rotatable Bonds 9

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2R,3R,4S,5S,6R)-2-[(2E,4R)-4-hydroxy-3,7-dimethylocta-2,6-dienoxy]-6-[[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6232 62.32%
Caco-2 - 0.8703 87.03%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.7916 79.16%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9111 91.11%
OATP1B3 inhibitior + 0.9265 92.65%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.8718 87.18%
P-glycoprotein inhibitior - 0.8011 80.11%
P-glycoprotein substrate - 0.8054 80.54%
CYP3A4 substrate + 0.6013 60.13%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8282 82.82%
CYP3A4 inhibition - 0.9765 97.65%
CYP2C9 inhibition - 0.8965 89.65%
CYP2C19 inhibition - 0.8643 86.43%
CYP2D6 inhibition - 0.8802 88.02%
CYP1A2 inhibition - 0.9030 90.30%
CYP2C8 inhibition - 0.7952 79.52%
CYP inhibitory promiscuity - 0.9130 91.30%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.7246 72.46%
Eye corrosion - 0.9887 98.87%
Eye irritation - 0.9550 95.50%
Skin irritation - 0.8080 80.80%
Skin corrosion - 0.9583 95.83%
Ames mutagenesis + 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6471 64.71%
Micronuclear - 0.7826 78.26%
Hepatotoxicity - 0.7317 73.17%
skin sensitisation - 0.8502 85.02%
Respiratory toxicity - 0.6222 62.22%
Reproductive toxicity + 0.6000 60.00%
Mitochondrial toxicity - 0.6250 62.50%
Nephrotoxicity - 0.8618 86.18%
Acute Oral Toxicity (c) III 0.6187 61.87%
Estrogen receptor binding + 0.5465 54.65%
Androgen receptor binding - 0.7449 74.49%
Thyroid receptor binding + 0.5663 56.63%
Glucocorticoid receptor binding - 0.6016 60.16%
Aromatase binding + 0.6474 64.74%
PPAR gamma + 0.6655 66.55%
Honey bee toxicity - 0.7854 78.54%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.9400 94.00%
Fish aquatic toxicity + 0.8221 82.21%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.10% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.47% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.82% 85.14%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.42% 97.25%
CHEMBL2581 P07339 Cathepsin D 89.92% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 87.72% 94.73%
CHEMBL226 P30542 Adenosine A1 receptor 86.97% 95.93%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.87% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.15% 97.09%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 80.68% 98.75%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 80.12% 80.33%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Rhodiola rosea

Cross-Links

Top
PubChem 101863492
LOTUS LTS0003697
wikiData Q104955554