3-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)chromen-4-one

Details

Top
Internal ID da68c77a-d00d-4c2e-bef6-6256d7e2ee4f
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides > Flavonoid-3-O-glycosides
IUPAC Name 3-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)chromen-4-one
SMILES (Canonical) COC1=C(C=CC(=C1)C2=C(C(=O)C3=C(C=C(C=C3O2)O)O)OC4C(C(C(C(O4)CO)O)O)OC5C(C(C(CO5)O)O)O)O
SMILES (Isomeric) COC1=C(C=CC(=C1)C2=C(C(=O)C3=C(C=C(C=C3O2)O)O)O[C@H]4[C@@H]([C@H]([C@H]([C@H](O4)CO)O)O)O[C@H]5[C@@H]([C@H]([C@@H](CO5)O)O)O)O
InChI InChI=1S/C27H30O16/c1-38-14-4-9(2-3-11(14)30)23-24(20(35)17-12(31)5-10(29)6-15(17)40-23)42-27-25(21(36)19(34)16(7-28)41-27)43-26-22(37)18(33)13(32)8-39-26/h2-6,13,16,18-19,21-22,25-34,36-37H,7-8H2,1H3/t13-,16-,18+,19+,21+,22-,25-,26+,27+/m1/s1
InChI Key YAZLWFHAKRXSJO-CGAFZRRXSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C27H30O16
Molecular Weight 610.50 g/mol
Exact Mass 610.15338487 g/mol
Topological Polar Surface Area (TPSA) 255.00 Ų
XlogP -0.80
Atomic LogP (AlogP) -1.77
H-Bond Acceptor 16
H-Bond Donor 9
Rotatable Bonds 7

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of 3-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)chromen-4-one

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4761 47.61%
Caco-2 - 0.9224 92.24%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.5114 51.14%
OATP2B1 inhibitior - 0.5763 57.63%
OATP1B1 inhibitior + 0.8968 89.68%
OATP1B3 inhibitior + 0.9679 96.79%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.6730 67.30%
P-glycoprotein inhibitior - 0.5757 57.57%
P-glycoprotein substrate + 0.5335 53.35%
CYP3A4 substrate + 0.6842 68.42%
CYP2C9 substrate - 0.8485 84.85%
CYP2D6 substrate - 0.8501 85.01%
CYP3A4 inhibition - 0.9417 94.17%
CYP2C9 inhibition - 0.9488 94.88%
CYP2C19 inhibition - 0.9370 93.70%
CYP2D6 inhibition - 0.9411 94.11%
CYP1A2 inhibition - 0.9224 92.24%
CYP2C8 inhibition + 0.8132 81.32%
CYP inhibitory promiscuity - 0.8596 85.96%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6677 66.77%
Eye corrosion - 0.9915 99.15%
Eye irritation - 0.9133 91.33%
Skin irritation - 0.8242 82.42%
Skin corrosion - 0.9582 95.82%
Ames mutagenesis - 0.5128 51.28%
Human Ether-a-go-go-Related Gene inhibition - 0.4212 42.12%
Micronuclear + 0.6433 64.33%
Hepatotoxicity - 0.6424 64.24%
skin sensitisation - 0.9265 92.65%
Respiratory toxicity + 0.6556 65.56%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity - 0.9368 93.68%
Acute Oral Toxicity (c) III 0.7135 71.35%
Estrogen receptor binding + 0.8647 86.47%
Androgen receptor binding + 0.6252 62.52%
Thyroid receptor binding - 0.4932 49.32%
Glucocorticoid receptor binding + 0.6566 65.66%
Aromatase binding + 0.6459 64.59%
PPAR gamma + 0.7418 74.18%
Honey bee toxicity - 0.7307 73.07%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity - 0.4193 41.93%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.56% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 97.00% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 96.46% 94.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.44% 96.09%
CHEMBL2581 P07339 Cathepsin D 95.98% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.09% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.58% 95.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 90.19% 99.17%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.76% 94.45%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 89.55% 85.14%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 87.51% 99.15%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 86.98% 86.92%
CHEMBL4208 P20618 Proteasome component C5 85.83% 90.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.30% 97.09%
CHEMBL3401 O75469 Pregnane X receptor 84.32% 94.73%
CHEMBL4940 P07195 L-lactate dehydrogenase B chain 83.60% 95.53%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 83.32% 95.83%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 83.20% 96.00%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 82.71% 95.78%
CHEMBL1951 P21397 Monoamine oxidase A 82.68% 91.49%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.67% 90.71%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 82.23% 95.64%
CHEMBL220 P22303 Acetylcholinesterase 82.15% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.74% 95.89%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.57% 97.14%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Glinus oppositifolius

Cross-Links

Top
PubChem 162957344
LOTUS LTS0229990
wikiData Q105345724